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scnpilot_solids1_trim150_scaffold_971_curated_5

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 5223..5750

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5L3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 175.0
  • Bit_score: 347
  • Evalue 5.70e-93
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EIL94754.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 175.0
  • Bit_score: 347
  • Evalue 8.00e-93
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 175.0
  • Bit_score: 302
  • Evalue 6.60e-80

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGACGGCCAGACCACACCAGCAACGCTTCGAATCACTGCTGCACGAACATCGCCGGATCGTGTTCAAGGTCGCCGGCCTGTACAGCCGCAGCGCCGCCGACCGCGATGACCTGGTGCAGGAGATCAGCGCGCAACTGTGGCGCTCGTTCGGCAGTTATGACGAGGCGCGCGCGAAGTTCTCCACCTGGATGTACCGCATCGCGCTGAACGTGGCGATCTCGCAGGCGCGGCGCGAGCGCTGGTCGGAATCCGACCGTTTCGAGCCGCTGGAAACGCATCACCTGGAGACGGTCGGCGGGGGCGAGGGCATCGCCGAACCGGACGAACGGCTGACCGCGCTGTACGCCTTCATCGGCCAGCTCGATCCACTCAATCGCGCGCTGATCCTGCTGTACCTGGAAGACCGCAACTACACCGAGATGGCCGAGATCCTCGGCATCAGCGAAACCAACGTGGCGACCAAGATCAGCCGCATCAAGCAGAAACTGCGCGGCCAGATGACCGCTGCACAAACCACCGGAGCATGA
PROTEIN sequence
Length: 176
MTARPHQQRFESLLHEHRRIVFKVAGLYSRSAADRDDLVQEISAQLWRSFGSYDEARAKFSTWMYRIALNVAISQARRERWSESDRFEPLETHHLETVGGGEGIAEPDERLTALYAFIGQLDPLNRALILLYLEDRNYTEMAEILGISETNVATKISRIKQKLRGQMTAAQTTGA*