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scnpilot_solids1_trim150_scaffold_3380_curated_7

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(5065..5631)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXS0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 188.0
  • Bit_score: 376
  • Evalue 2.10e-101
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EIL92011.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 188.0
  • Bit_score: 376
  • Evalue 2.90e-101
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 187.0
  • Bit_score: 334
  • Evalue 2.90e-89

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGAACCACAGCGCGCCTGATGCATCGTACTGGTCGGCACAGATGGCGGCCGTGTCGGTACAGCGCGACCGTGCGAGTTTCATGCGCATCTACGATCACTTCGCGCCGCGCCTGCAGCGCTACCTGCGCAACCTGGGCGTGGCCGAGTCGATCGCCGACGAGCTGGTGCAGGAGGCGCTGCTGACGCTGTGGCGCAAGGCGGCGATGTTCGATCCGGCGCGCGCCAGCCTCGCCACCTGGCTGTATCGCGTGGCGCGCAACCTCCACATCGACCACGTGCGCAGGGAACCGCACTGGCTGCCGATCCAGGAAGGCCTGGACCGGCTCGACCATCTCGAATCCGGTCGGCTCGACTCGCAACCCGAATCCTCCTTCGACCAGGATCTGCTGAAGCAGGCCATCGATCACCTTCCACCCGTGCAGGCCAAGCTTGTTCGCATGTGTTACCTCGAAAGCAAAAGTCACAGCGAGATCGCCCGCGAGCTGGACATGCCGCTGGGCTCGGTCAAGTCCTCGCTGCGGCGCTCGTTTGCCAAACTGCAGGGCAGCATGAGGGCCCCGCGATGA
PROTEIN sequence
Length: 189
MNHSAPDASYWSAQMAAVSVQRDRASFMRIYDHFAPRLQRYLRNLGVAESIADELVQEALLTLWRKAAMFDPARASLATWLYRVARNLHIDHVRREPHWLPIQEGLDRLDHLESGRLDSQPESSFDQDLLKQAIDHLPPVQAKLVRMCYLESKSHSEIARELDMPLGSVKSSLRRSFAKLQGSMRAPR*