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scnpilot_solids1_trim150_scaffold_803_curated_18

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(20006..20365)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5D3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 230
  • Evalue 9.00e-58
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 230
  • Evalue 1.30e-57
LSU ribosomal protein L20P similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 119.0
  • Bit_score: 226
  • Evalue 5.40e-57

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGGCTCGTGTAAAGCGTGGCGTCACCGCCCGTCGTCGTCACAAGAAAATCATCGGCCGCGCGAAAGGTTACTACAATGCCCGTCGCAAGGTCTTCCGCGTAGCCAACCAGGCCGTCATCAAGGCTGGCCAGTACGCGTACATCGGCCGCAAGCAGCGCAAGCGCCAGTTCCGTGCCCTGTGGATCGTGCGTATCAACGCCGCCGCTCGCATGTTCGGCCTTTCCTACAGCCGCCTCATCAATGGCCTCTCCAAGGCCGGCATTACGGTGGACCGCAAGGTTCTCGCCGATATCGCCGTGCACGACATCAAGGCTTTTGGTGTGATCGCCGAAAAAGCAAAGGCCAGTCTGGCTGCTTGA
PROTEIN sequence
Length: 120
MARVKRGVTARRRHKKIIGRAKGYYNARRKVFRVANQAVIKAGQYAYIGRKQRKRQFRALWIVRINAAARMFGLSYSRLINGLSKAGITVDRKVLADIAVHDIKAFGVIAEKAKASLAA*