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scnpilot_solids1_trim150_scaffold_37250_curated_1

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 1..1101

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 367.0
  • Bit_score: 715
  • Evalue 5.20e-203
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 367.0
  • Bit_score: 685
  • Evalue 1.30e-194
DNA-directed RNA polymerase subunit beta' n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VS91_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 367.0
  • Bit_score: 715
  • Evalue 3.70e-203

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
ACCAACAAGCGCGCGCTGAAGTCGCTGGCCGACATGATCAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTGCTGGGCAAGCGCGTGGACTACTCCGGTCGCTCGGTGATCGTGGTCGGTCCGACCCTGCGCCTGCACCAGTGCGGCCTGCCCAAGAAGATGGCGCTTGAGCTGTTCAAGCCGTTCATCTTCGCCAAGCTGCAGGCGCGTGGCGAAGCCACCACCATCAAGGCGGCCAAGAAGCTGGTGGAGCGCGAGGAAGCGCAGGTCTGGGACATCCTCGAAGAGGTGATCCGCGAACATCCGGTCATGCTGAACCGCGCGCCGACCCTGCATCGCCTCGGCATCCAGGCGTTCGAGCCGAAGCTGATCGAAGGCAAGGCGATCCAGCTGCATCCGCTGGTGTGTACCGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTCCATGTGCCGCTGTCGATCGAGGCGCAGCTGGAAGCGCGCACCTTGATGATGTCGACCAACAACATCCTGTCGCCGGCCAACGGCGAGCCGATCATCGTGCCGACGCAGGACGTGGTGCTGGGTCTGTATTACCTGACCCGCGAGCTCATCAACGCCAAGGGCACCGGCATGGTGTTCTCCGGCATCGGTGAGGCACGTCGTGCGTACGACAACCGCGCAGTGGAATTGCACGCCAAGGTCAAGGTGCGCATGAAGCTGGTGCACATCGCCGAAGACGGCACCCGCACGCAGCAGACCCGGATCGTCGACACGACGGTGGGTCGTGCCCTGCTGGCCGAAATCATGCCCGAGGGTCTGCCGTTCGAGCTGGCCAACACCGAGCTGACCAAGAAGAACATCTCGCGCCTGATCAACTCCAGCTACCGTCTGCTGGGCCTGAAGGACACGGTCGTGTTCGCCGATCAGCTGATGTACGCCGGCTATCGCTACGCGACCCGGTCGGGCATCTCGATCGGCATCGACGACATGCTGATCCCGGACGAGAAGAAGCCGATCCTGGAAGAAGCCGAGAAGGAAGTCGTCGAGATCCAGCAGCAGTACCAGTCGGGTCTGGTCACCGCCGGCGAGCGCTACAACAAGGTGGTCGACATC
PROTEIN sequence
Length: 367
TNKRALKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPTLRLHQCGLPKKMALELFKPFIFAKLQARGEATTIKAAKKLVEREEAQVWDILEEVIREHPVMLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSIEAQLEARTLMMSTNNILSPANGEPIIVPTQDVVLGLYYLTRELINAKGTGMVFSGIGEARRAYDNRAVELHAKVKVRMKLVHIAEDGTRTQQTRIVDTTVGRALLAEIMPEGLPFELANTELTKKNISRLINSSYRLLGLKDTVVFADQLMYAGYRYATRSGISIGIDDMLIPDEKKPILEEAEKEVVEIQQQYQSGLVTAGERYNKVVDI