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scnpilot_solids1_trim150_scaffold_7667_curated_2

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(883..1491)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSI5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 202.0
  • Bit_score: 391
  • Evalue 6.80e-106
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:EIL90176.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 202.0
  • Bit_score: 391
  • Evalue 9.50e-106
Transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 191.0
  • Bit_score: 210
  • Evalue 5.20e-52

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGAACGACTCCGTCCTCACCCCCGAACGCATCCTCGCCGCCGCCGAGGATGTCCTGCGCCGCTATGGTCCCGGCAAGGCCACCGTGGTCGACGTGGCACAGGCGCTCGGGGTCAGCCACGGCAGCGTGTACCGCCACTTCGCCAGCAAGGCGGCACTGCGCGAGGCGGTCCTGCGCGGCTGGCTGGCGCGCTCGATGGCGCCGCTGCAGGCGATCGCCAACAGCCGCACGCCGCCGCCGGCGCGCCTGCGCCAGTGGTTTACCACCCTGCGCCAGACCAAGCGTGACAACGTGCTGGGCGACCCCGAGCTGTTCGCCACCTACAGCGCGCTGGCGGCGGAAGCGGGCGACGCGATCGCCGAGCACAAGGAGCGCATGCAGCAGCAGATCGCCTCGATCCTTGCCGCCGGCATGGCCAGTGGCGACTTCCGTGAGCTCGATCCGCCCGCCGCCGCGCGGGCCCTGTTCGACGCCACGGCGCGCTTCCACTATCCGGGGCTTTCCCACCTGTGGAACCAGCCCGGTGAGGATGTGGCGTTTACCCGACTGCTCGACCTGCTGCTCGCCGGCCTGGCCCCGGCACCCGCTCCGCCACGACGGCGCAAATAG
PROTEIN sequence
Length: 203
MNDSVLTPERILAAAEDVLRRYGPGKATVVDVAQALGVSHGSVYRHFASKAALREAVLRGWLARSMAPLQAIANSRTPPPARLRQWFTTLRQTKRDNVLGDPELFATYSALAAEAGDAIAEHKERMQQQIASILAAGMASGDFRELDPPAAARALFDATARFHYPGLSHLWNQPGEDVAFTRLLDLLLAGLAPAPAPPRRRK*