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scnpilot_solids1_trim150_scaffold_25822_curated_3

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(519..1109)

Top 3 Functional Annotations

Value Algorithm Source
Putative conjugal transfer TRAF transmembrane protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNY4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 195.0
  • Bit_score: 319
  • Evalue 2.40e-84
Putative conjugal transfer TRAF transmembrane protein {ECO:0000313|EMBL:EIM01176.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 195.0
  • Bit_score: 319
  • Evalue 3.40e-84
traF; plasmid conjugal transfer transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 195.0
  • Bit_score: 269
  • Evalue 1.20e-69

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGACGGTCATTCCCACCATCGACATTGCGCTACGTCCTCGCTCGCGCCGGCGCGTTCGCCTCGTGCTCGCGGCGCTGTCCGCTGGCGGCCTCGCTGTGCTGGCCTGGGCGTCCTTCGTGTCGCCGCTGCCGCGCCTGGTGTACAACCCGTCCGACAGTGTGGCGGTCGGCTGGTATCGCGTCGATCCGCCCACGCGCCACGCCGGCTCGCTGCCGCCTGCGATGCACGTTGGCAGCATCGTGCTGGTTCCGTTGCCGGCCACCGCCGCCGCACTGGCGGTGCGGCGCGGCTATCTTCCACTGCGCATCCCGCTGCTCAAGCCGGTCGCTGCCGTCGCGCCGCAGCAAGTGTGCATCACCGAGGGCATCGTGCGCATCGACGGCGTGCCGGTAGCCGCCGTGCTGCGTACCGACGGGATAGGCCGGCCGCTGCGCGCCTGGCTATCCTGCCGCTGTCTTCGTCCCGGCGAGCTGTTCCTGCTCAGCACGACCAACCCGGCGTCGTTCGACAGCCGGTATTTCGGGCCGGTGCGCGCCGATACCGTGCTCGGCGTGGCGCATCCGGTCCGGCTGGAGACACGCCCATGGTGA
PROTEIN sequence
Length: 197
MTVIPTIDIALRPRSRRRVRLVLAALSAGGLAVLAWASFVSPLPRLVYNPSDSVAVGWYRVDPPTRHAGSLPPAMHVGSIVLVPLPATAAALAVRRGYLPLRIPLLKPVAAVAPQQVCITEGIVRIDGVPVAAVLRTDGIGRPLRAWLSCRCLRPGELFLLSTTNPASFDSRYFGPVRADTVLGVAHPVRLETRPW*