ggKbase home page

scnpilot_solids1_trim150_scaffold_409_curated_6

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(11945..14428)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 827.0
  • Bit_score: 1638
  • Evalue 0.0
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:EIL89187.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 827.0
  • Bit_score: 1638
  • Evalue 0.0
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 824.0
  • Bit_score: 1330
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2484
ATGCGGCCGCACAAGTCTGCCGAGGTATTGCCTTCGCTCGCAAACCGGCCGGACTGGTCGGAGAAGGTGCTGCGCGGCACGCCGGTGCTGCTGGCTTACCTCGACCACGAGCAGCGTTTCCGCTATGCCAACGAAACCCATCGGCACTGGCTGGGGCTCGATCCCGCGCGGCTGATCGGCCGGCACCTGGTCGACGTGATCGGCGAGCGCAACCACCGGCTGGCCGGCACGGCGCTGGCCCAGGCCTACGCGGGCACCGCGGCCAGCTACGAGGGCGAGCTGTTCAACGGCAACGAGCGCCGCTACGCGCACGGCAATTTCCAGCCCGACTTCGATCCGGACGGCCACGTCTGCGGCATCTTCACCGCGCTGATCGACATCACCGAACGGCGCACCCTGGAACTGCAGCTGCACGAAAGCGAGCAGCGCTTCTTCAGCGCGTTCCAGCACGCGGCGATCGGCATGGCGCTGACCAAGCCGGACGGCCAGTTCCTGCGCGTCAACGCGGCGGTCTGCCAGATGCTGGGCTATTCGGAGCAGGAGCTGCTGCAGCAGGACATCGGCCGGCTGAGCCATCCCGAGGACGTCGCCGCCGACCAGGCGCTGATGGCCCAGCTGCTGGCCGGCGAGCGCGATTCCTACCAGCTGGAGAAGCGCAACTTCCACAAGCTCGGCCACGTGGTGCACATCCTGCTCAGCGTGTCGCTGGTGCGCGATGCGGCCGGGGCGCCGCTGTATTTCGTTTCCCAGGTGCAGAACATCAGCCAGCGCAAGGCCTTCGAGGACGCGCTGCACCGCGAGCGCGAGCTGGCCGAGGTGACCCTGCGCTCGATCGGCGACGCGGTGATCACCACCGACCCCCAAGTCCGCGTCACCTCGCTCAACCCGATCGCCGAGGCGATGACCGGCTGGAGCAGCGCCGAGGCGAACGGCCGGCCGATCGAGGAGATCTTCCAGCTGTTCGACGCCCAGGGCGGCCTCGCCGTGGCCAACCCGCTGCGCTCGGCGATCGAGCAGAACCTCATCGTCGACCTGGCCGGCAAGACCCTGCTGCGCCATCGCCACGGCTTCGACACGCCGGTGGAGGATTCCTCCGCGCCGATCCACGACCACGCCGGCAACGTGATCGGCGGCGTACTGGTGTTCCATGACGTCAGCGAGAACCGGGCGCTGGCGCTGAAAATGATCCACCTGACCCAGCACGACACGCTGACCGGCCTGCCCAACCGCAGCCAGCTGCCCGGCCACATCAACCGGGCGATCGACAGCGCCAGCCGGCGCCGGCAACGCGCCGCGGTGCTGTACATCGACATCGACAACTTCAAGCAGGTCAACGAGCTGGTCGGCCATACCGCCGGCGACCAGGTACTGCGCTCGTTCATCGGCCAGCTGCAGCGCTGCCTGACCGGCGACGAGTTGCTCAGCCGCTATGGTGGCGACGAATTCGTGGTGGTGCTGCCGCACGTGGACAGCGCGGGCGAGGCGGCGGTGCTGTGCCGCAACCTGATCACCCACGGCGAACAGACCCGCATCGCCGGCCAGCCGGAGCTGTCGCTGCACCTGAGCATCGGCATCAGCGTCTATCCGGACGACGCCACCGGCGCCGACGAACTGGTGCAGCATGCCGAGACCGCGCTGATGGCGGCCAAGGCGCAGGGCCAGCACGGCTATCGCTTCTTCACCGCGTCGATGAACGAGCGGGCGCGGGCGCAGCGGCGAATCGAGACGGGCCTGCGCCAGGCCTTGCCGGGCAATCAGCTGAAGCTGCACTACCAGCCGAAGGTCGACGCGCACAGCGGCCGCATCGTCGGGGCCGAGGCCTTGCTGCGCTGGCAGCTCAACGGGCGCGATCTGTACAAGCCGGACCAGTTCATCCCGGTGGCCGAGGATTCCGGGCTGATCCTGCCGATCGGCGCCTGGGTGCTGCGCCAGGCCTGCCGCCAGGCGCGGATGTGGCAGCAGGCCGGGCACGAGATCCCGATTTCGGTGAACGTGTCGCCGCTGCAGTTCCAGCACGCGGATTTCTACACCTGGCTGGACGACGTGCTGGAAGAGGCCGGGCTGGAGTCGCGCCTGCTGGAGCTGGAACTCACCGAACGCATGGTGATGTCCGGCGGCGAGGCCACCACGGGCCTGCTGCAGCGGATCAAGCGCCGCGGCGTGCGACTGTCGCTGGACGACTTCGGCACCGGCTATTGCAGCCTGTCTTACCTGAAGCATTTCCCCATCGACGCGCTGAAGATCGACCGCATGTTCGTGCGCGACATCATCAGCGATCACGACACCGCGACCATCACCAGCGCGATTATCGCGATGGCGCGCAGCCTCAACAAGGACGTGATCGCCGAAGGCGTGGAAACGCGCGAACAGGGCAGTTTCCTGCGCCACGCCGGCTGCTCGCAGCTGCAGGGTTTCCTGTACGGCATGCCGATGCCGGCCAGCGTACTGCAGAAGCTGCTCGCCGAACCGGTGTCCGCGCCGTAG
PROTEIN sequence
Length: 828
MRPHKSAEVLPSLANRPDWSEKVLRGTPVLLAYLDHEQRFRYANETHRHWLGLDPARLIGRHLVDVIGERNHRLAGTALAQAYAGTAASYEGELFNGNERRYAHGNFQPDFDPDGHVCGIFTALIDITERRTLELQLHESEQRFFSAFQHAAIGMALTKPDGQFLRVNAAVCQMLGYSEQELLQQDIGRLSHPEDVAADQALMAQLLAGERDSYQLEKRNFHKLGHVVHILLSVSLVRDAAGAPLYFVSQVQNISQRKAFEDALHRERELAEVTLRSIGDAVITTDPQVRVTSLNPIAEAMTGWSSAEANGRPIEEIFQLFDAQGGLAVANPLRSAIEQNLIVDLAGKTLLRHRHGFDTPVEDSSAPIHDHAGNVIGGVLVFHDVSENRALALKMIHLTQHDTLTGLPNRSQLPGHINRAIDSASRRRQRAAVLYIDIDNFKQVNELVGHTAGDQVLRSFIGQLQRCLTGDELLSRYGGDEFVVVLPHVDSAGEAAVLCRNLITHGEQTRIAGQPELSLHLSIGISVYPDDATGADELVQHAETALMAAKAQGQHGYRFFTASMNERARAQRRIETGLRQALPGNQLKLHYQPKVDAHSGRIVGAEALLRWQLNGRDLYKPDQFIPVAEDSGLILPIGAWVLRQACRQARMWQQAGHEIPISVNVSPLQFQHADFYTWLDDVLEEAGLESRLLELELTERMVMSGGEATTGLLQRIKRRGVRLSLDDFGTGYCSLSYLKHFPIDALKIDRMFVRDIISDHDTATITSAIIAMARSLNKDVIAEGVETREQGSFLRHAGCSQLQGFLYGMPMPASVLQKLLAEPVSAP*