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scnpilot_solids1_trim150_scaffold_3261_curated_3

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 1415..1951

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 363
  • Evalue 1.40e-97
Peptide deformylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSJ3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 363
  • Evalue 1.00e-97
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 178.0
  • Bit_score: 334
  • Evalue 2.10e-89

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGATTCGTGAAATCCTGAAGATGGGCGATCCGCGCCTGCTGCGCGTCGCGCCGAGCGTGCCCGCCGCGATGATCGGCACGGCCGAGCTCGATGCGCTGATCGTCGACATGTTCGACACCATGCACGCCGCCGACGGCGTGGGGCTGGCCGCGCCGCAGATCGGTGTCGACCTGCAGCTGGTGATCTTCGGTTTCGACAACAACGAACGCTACCCCGAGGCGCCGGCGGTGCCGCGCACGATCCTGCTCAATCCGGTGATCACGCCGTTGTCGCAGGACATGGAGGAGGGCTGGGAAGGCTGCCTGTCGGTGCCGGGCCTGCGTGGCGCGGTGAACCGCTACAGCCTGATCCGCTACCAGGGCATCGACCCCCAAGGCGAACGCATCGACCGCCGCGCCGAAGGCTTCCACGCCCGCGTGGTGCAGCACGAATGCGACCACCTGATCGGCCGGCTGTATCCGTCGCGCATCACCGACTTCAGCCGCTTCGGCTACACCGACGTGCTGTTTCCGGGGCAGGAGCTGGGAGACGACTGA
PROTEIN sequence
Length: 179
MIREILKMGDPRLLRVAPSVPAAMIGTAELDALIVDMFDTMHAADGVGLAAPQIGVDLQLVIFGFDNNERYPEAPAVPRTILLNPVITPLSQDMEEGWEGCLSVPGLRGAVNRYSLIRYQGIDPQGERIDRRAEGFHARVVQHECDHLIGRLYPSRITDFSRFGYTDVLFPGQELGDD*