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scnpilot_solids1_trim150_scaffold_332_curated_22

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(27338..28042)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRG2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 231.0
  • Bit_score: 440
  • Evalue 1.10e-120
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 231.0
  • Bit_score: 440
  • Evalue 1.60e-120
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 231.0
  • Bit_score: 413
  • Evalue 6.10e-113

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGTCAGCCCATGCCCATCCCGCATCCCTGGACTACGCCGCGCTGGACGACCACGCGCTGGTGGCCGAGGTCCGCGCCGGCCATCGCGAGGCGTTCCGCCACATCATGCAGCGCTGCAACCAGCGGCTGTTCCGCGTGGCGCGCGCCGTGCTCGGCGAAGACTCGGAAGCGGAAGACGTGCTGCAGGAATCGTATATGCGTGCCTATCACAAGCTGGATTCGTTCCGCGGCGACTCGACCCTGCTGACCTGGCTGACCAGCATCGTGCTGAACGAGGCGCGCGGCCGGCTGCGCAAGCGCCACACCATGGTCGGCTTGGAGCAGGTCGACGCGGCGCCCGACGACAGCCACCAGATCATCCAGTTCCCGTCGAAGTTCGGCAGCGAGGACCCGGCCGTGTCCGCCGCCCGCGCGCAGATCCGCCGCCTGCTGGAACACGCCATCGACGCACTGCCGCCGGCGTTCCGCACCGTGTACATGATGCGCGACGTGGAAGAGTGTTCGGTGGAGGAAACCGCAACCCTGCTGGCGATCAAGCCGGAAACCGTGAAGACCCGGCTGCATCGCGCCCGACGCCTGCTGCGCGCCGCGCTGCACGACCAGCTGGCCGCCACCATGGGCGAAGCCTTCCCGTTCATGGGCCAGCGCTGCGCCCGCGTCACCGACGCGGTGATGGCGCGACTGGAAAGCGAGTTGGCCGGCTGA
PROTEIN sequence
Length: 235
MSAHAHPASLDYAALDDHALVAEVRAGHREAFRHIMQRCNQRLFRVARAVLGEDSEAEDVLQESYMRAYHKLDSFRGDSTLLTWLTSIVLNEARGRLRKRHTMVGLEQVDAAPDDSHQIIQFPSKFGSEDPAVSAARAQIRRLLEHAIDALPPAFRTVYMMRDVEECSVEETATLLAIKPETVKTRLHRARRLLRAALHDQLAATMGEAFPFMGQRCARVTDAVMARLESELAG*