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scnpilot_solids1_trim150_scaffold_1832_curated_3

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(1999..2862)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYL1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 287.0
  • Bit_score: 579
  • Evalue 1.50e-162
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 287.0
  • Bit_score: 579
  • Evalue 2.00e-162
Beta-barrel assembly machine subunit BamD similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 277.0
  • Bit_score: 486
  • Evalue 6.90e-135

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGCGCCCAACAATCGACTCGCCGAAGCTGCCGATGTCCAAAATGACCGTGATGAAATTGCTCGTGCTGCTGGTGGCCGCGATGTCGATGAGCGCATGCTCGATGTTCAAGTCGAAGCAGAACATCGACACGATGCCGCTGGAGGCGCTGTACGACAACGCGCACAACTCGCTGGAAAACGCAGATTACGCTGCGGCCACCAAGGCTTACCAGCGCCTGATCGCCCGCTTCCCGTCCGGCGAGTACAACGAACAGGCCCAGCTGGACCTGGCCTACTCGCAGTACAAGGACAACCAGCCCGATGATGCCCTGTCGACGGTGAACCGCTTCATCAAGACCTATCCGGCCAACAAACACGTCGATTATGCCTATTACCTGCGCGGTCTGATCAATTTCGATCGCACCGGCACCGTGCTGGAGCGCTGGTTCCCCCGCTCGGACAAGGATTCGCGCCGCGACCAGGGCTACAACCTGCAGTCGTTCGACGACTTCTCCGAGCTGTCGCGTCGTTTCCCGGACAGCGCCTATACCGCCGATGCCCGCCAGCGGATGATCTACCTGCGCAACATCCTGGCCCAGTACGAGATCAACGTGGCCGAGTTCTACCTGCGCAACAAGGCGTACGTCGCCTCCGCCGACCGTGCCCAGTACGTGGTCGAGCATTACCAGCAGGCGCCGCAGACCGGCGACGCCCTGGCCATCCTCACCCGCAGCTACCTGGCGCTGGACCAGAAGGCGCTGGCCGAGCAGAGCCGCCAGGTGCTGGCCATGAACTACCCGAATCACCCCTACCTCACCGACGCCAAGTGGCCGCATGCACCGTCCACCCTGCGCAAGATGGTGCCGTTCTCGGGCCATCACTGA
PROTEIN sequence
Length: 288
MRPTIDSPKLPMSKMTVMKLLVLLVAAMSMSACSMFKSKQNIDTMPLEALYDNAHNSLENADYAAATKAYQRLIARFPSGEYNEQAQLDLAYSQYKDNQPDDALSTVNRFIKTYPANKHVDYAYYLRGLINFDRTGTVLERWFPRSDKDSRRDQGYNLQSFDDFSELSRRFPDSAYTADARQRMIYLRNILAQYEINVAEFYLRNKAYVASADRAQYVVEHYQQAPQTGDALAILTRSYLALDQKALAEQSRQVLAMNYPNHPYLTDAKWPHAPSTLRKMVPFSGHH*