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scnpilot_solids1_trim150_scaffold_599_curated_29

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(25592..26185)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide transport periplasmic protein LptA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4T8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 197.0
  • Bit_score: 382
  • Evalue 2.40e-103
Lipopolysaccharide transport periplasmic protein LptA {ECO:0000313|EMBL:EIL94479.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 197.0
  • Bit_score: 382
  • Evalue 3.30e-103
lipopolysaccharide transport periplasmic protein LptA similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 197.0
  • Bit_score: 323
  • Evalue 5.30e-86

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGACGTTCATGCCACCTTCCCGCCGCGCAAGCGCTAGGTTCGCGCTCGGCATTGCCGCTCTGGGCCTGCTCGCGGCACAACCTGCCCTGGCGAAAAAGAGCGACCGCCAGCAGGAAATGCACGTCGGCGCGAAACATTTCGACGGTTTCCAGAAGCCCAACAGCGTCAGCACGCTGAGCGGCAGCGTGGTGATCACCCAGGGCACCCTGAAAGCCACCGGGGCGCAGGCCAAGGTGTATTTCGACGGCGACAGCCAGATCAGCCGCGTGGTGATCACCGGCAGCCCGGCCCATCTTGAGCAACTGGACGAGAACAACAACCTGGTGCTGGGCGACGCCGCCACGCTCGACTACGACAACCTCAAGGGGATCGCCGTGCTCAGCGGCAACGCCTCGATCACCCAGAAGGGACGTGGCGACGCCCACGGCGACAGGCTCACCTACAACACCGAGACCAGCCAGATGACCGGCGAAAGCAACGGTGACGGCCTGGTCCACATGACCTTCAAGCCGACGGCGAAACCTGCCGGAGACGCGGCGCCCGCCGCATCCTCGAGCACACCGGCCAAGCCGGCCACGCAGGGACAGCCGTAA
PROTEIN sequence
Length: 198
MTFMPPSRRASARFALGIAALGLLAAQPALAKKSDRQQEMHVGAKHFDGFQKPNSVSTLSGSVVITQGTLKATGAQAKVYFDGDSQISRVVITGSPAHLEQLDENNNLVLGDAATLDYDNLKGIAVLSGNASITQKGRGDAHGDRLTYNTETSQMTGESNGDGLVHMTFKPTAKPAGDAAPAASSSTPAKPATQGQP*