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scnpilot_solids1_trim150_scaffold_295_curated_18

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 13336..14166

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 276.0
  • Bit_score: 543
  • Evalue 2.00e-151
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 276.0
  • Bit_score: 460
  • Evalue 3.00e-127
Shikimate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUD9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 276.0
  • Bit_score: 543
  • Evalue 1.50e-151

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGCCCATCGCCCAGTTCGCCGTATTCGGCCATCCGATCAGCCATTCGCTGTCACCGCGCATCCACCAGGCGTTCGCGCAACAGTTCGGCATCGAACTGGAATACCGCGCGGTCGACGCGGCCCCGGCCGATTTCGCCGAGGCCGTGCGGCGGTTCTTTGCCAGCGGCGGTCGCGGCGGCAACGTCACCCTGCCGCACAAGGCCGCCGCCTTCGCGCTGGCCGACCAGCGCAGCGCGGCCGCCACCCGCGCCGGCAGCGCGAACGTGCTGACCCGGCTGCCTGATGGCCGGCTGGCGGCACACAACACCGATGGTGCAGGCATGGTGCGCGACATCACCGAGCGCCATGACCTGGACCTGCGCGGCCATACCGCGCTACTGCTGGGCGCGGGCGGCGCCGCGCATGGCGTGGCGTGGAACCTGCTGGACGCCGGCGTGGAAACGCTGACCATCGTCAACCGTTCGCCCGAAGCGGCCGATGTGCTGGCCGACGCGATCGGCGACCCGGCGCGTGCGCACACGCGCTACTGGGACGACCTGGCCCATATCGGCAGCTACGACCTGATCGTCAACGCGACCTCGGCCGGCGTGCTGGGCGTGGCGCTGCAACTGCCGTTTTCGCTGATCGGCGCGCGTGCGCTGTGCTACGACCTGTCCTACGGCCCCGCCGCCGGCAGCTTCCTGGCGTGGGCCAAGGCGGCGAGTGCGCGCTATGCCGTCGACGGCCTCGGCATGCTGGTGGAAACCGCGGCCGACGCGTTCGAGTTGTGGCACGGTCGGCGCCCCGAGACCGAACCGGTCTATCAGTCCCTGCGTCAGCAAGCCGCGTGA
PROTEIN sequence
Length: 277
MPIAQFAVFGHPISHSLSPRIHQAFAQQFGIELEYRAVDAAPADFAEAVRRFFASGGRGGNVTLPHKAAAFALADQRSAAATRAGSANVLTRLPDGRLAAHNTDGAGMVRDITERHDLDLRGHTALLLGAGGAAHGVAWNLLDAGVETLTIVNRSPEAADVLADAIGDPARAHTRYWDDLAHIGSYDLIVNATSAGVLGVALQLPFSLIGARALCYDLSYGPAAGSFLAWAKAASARYAVDGLGMLVETAADAFELWHGRRPETEPVYQSLRQQAA*