ggKbase home page

scnpilot_solids1_trim150_scaffold_289_curated_5

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(8629..9567)

Top 3 Functional Annotations

Value Algorithm Source
PAS/PAC sensor-containing diguanylate cyclase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWR9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 312.0
  • Bit_score: 624
  • Evalue 5.60e-176
PAS/PAC sensor-containing diguanylate cyclase {ECO:0000313|EMBL:EIL91660.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 312.0
  • Bit_score: 624
  • Evalue 7.90e-176
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 307.0
  • Bit_score: 529
  • Evalue 5.90e-148

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGGCCGATTTCGAAAAGCTGGAACCCGACAGCACCGTCTACCGCACACTGCTGGAGTCCACCAAGGCCATTCCCTGGAAGATCGACTGGGACAGCAAGCAGTTCGCCTATATCGGACCGCAGATCGAGGCGCTGCTGGGCTGGACGCCGGCGAGCTGGCAGACGGTGGGCGACTGGGCCAGCCGCATGCATCCGCAGGATCGCGAGTGGGTGCTGAATTTCTGCGTGGCGCAATCGCAGGCCGGTGTCGATCATGAAGCCGACTACCGGGCGCTGACCCGCGACGGCCACTACGTGTGGATTCGCGACGTGGTGCACGTGGTGCGCCGGGCGGACGGTTCGGTCGATTCGCTGATCGGCTTCATGTTCGACATCAGCGAACGCAAGCAGACCGAACAGAAACTGGCGAGCCTGCAGAAGGAGCTGGAGGAACTGTCCTTCCGCGACGGTCTCACCGGCGTGGCCAACCGACGCCGCTTCGATGCGCTGATGGAACTGGAATGGAGCAACGCGCGGCGCAATCGCCAGCCGCTGTCGCTGCTGATGATCGATATCGACTACTTCAAGCAGTACAACGACTGCTACGGCCACCTCGAAGGCGACGCCTGCCTGAAGCGCGTGGCCTGGCTGCTGGCTTCCGCCGCGACCCGCGCACGCGACCTGCTGGCGCGTTTCGGCGGCGAGGAATTCGTGCTGCTGCTGCCGGAAACCGACGAGGCGGCGTCGCACAAGCTGGCCGCGCGCTGCCGCGACCTGATCCTGGCCGAGCAGATTCCCCATGCGCAGTCCGCGGTCGGCCCGGTGCTGACCATCAGCGTCGGCGCGGCCACCTGCATTCCCGCGCACGCCGAGGAGCTGCGCGGCTTCCTCGACAGCGTCGACAAGCGGCTGTACCGGGCCAAGCAGCAGGGCCGGGACTGCATCGTGGCGGCAAGCTGA
PROTEIN sequence
Length: 313
MADFEKLEPDSTVYRTLLESTKAIPWKIDWDSKQFAYIGPQIEALLGWTPASWQTVGDWASRMHPQDREWVLNFCVAQSQAGVDHEADYRALTRDGHYVWIRDVVHVVRRADGSVDSLIGFMFDISERKQTEQKLASLQKELEELSFRDGLTGVANRRRFDALMELEWSNARRNRQPLSLLMIDIDYFKQYNDCYGHLEGDACLKRVAWLLASAATRARDLLARFGGEEFVLLLPETDEAASHKLAARCRDLILAEQIPHAQSAVGPVLTISVGAATCIPAHAEELRGFLDSVDKRLYRAKQQGRDCIVAAS*