ggKbase home page

scnpilot_solids1_trim150_scaffold_734_curated

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_734_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..393)
DNA (393bp) protein (131aa)
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:EIL95049.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EIL95049.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA polymerase III subunits gamma and tau n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F8_9GAMM
DNA polymerase III, subunit gamma/tau
scnpilot_solids1_trim150_scaffold_734_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(973..1731)
DNA (759bp) protein (253aa)
Beta-lactamase superfamily metal-dependent hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F7_9GAMM
Beta-lactamase superfamily metal-dependent hydrolase {ECO:0000313|EMBL:EIL95048.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
metal-dependent hydrolase, beta-lactamase superfamily III
scnpilot_solids1_trim150_scaffold_734_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1728..2459)
DNA (732bp) protein (244aa)
3-deoxy-D-manno-octulosonic acid kinase {ECO:0000256|HAMAP-Rule:MF_00521}; Short=Kdo kinase {ECO:0000256|HAMAP-Rule:MF_00521};; EC=2.7.1.166 {ECO:0000256|HAMAP-Rule:MF_00521};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
3-deoxy-D-manno-octulosonic acid kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F6_9GAMM
Mn2+-dependent serine/threonine protein kinase
scnpilot_solids1_trim150_scaffold_734_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2495..3547
DNA (1053bp) protein (351aa)
ADP-heptose--LPS heptosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F5_9GAMM
ADP-heptose--LPS heptosyltransferase {ECO:0000313|EMBL:EIL95046.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ADP-heptose:LPS heptosyltransferase
scnpilot_solids1_trim150_scaffold_734_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3551..3949)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95045.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_734_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3975..5870)
DNA (1896bp) protein (632aa)
Histidine ammonia-lyase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F3_9GAMM
Histidine ammonia-lyase {ECO:0000313|EMBL:EIL95044.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
histidine ammonia-lyase
scnpilot_solids1_trim150_scaffold_734_curated_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5962..6255)
DNA (294bp) protein (98aa)
Excinuclease ABC subunit C n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIS9_9GAMM
Excinuclease ABC subunit C {ECO:0000313|EMBL:EIL99370.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
excinuclease ABC subunit C; K07461 putative endonuclease
scnpilot_solids1_trim150_scaffold_734_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6403..7791)
DNA (1389bp) protein (463aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F2_9GAMM
scnpilot_solids1_trim150_scaffold_734_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8129..8941)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95042.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_734_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8953..10428)
DNA (1476bp) protein (492aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F0_9GAMM
scnpilot_solids1_trim150_scaffold_734_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10456..11085)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6E9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95040.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative membrane protein, required for colicin V production
scnpilot_solids1_trim150_scaffold_734_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11110..12123)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6E8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95039.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_734_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12188..13486)
DNA (1299bp) protein (433aa)
Bifunctional folylpolyglutamate synthase/dihydrofolate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6E7_9GAMM
Bifunctional folylpolyglutamate synthase/dihydrofolate synthase {ECO:0000313|EMBL:EIL95038.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
folylpolyglutamate synthase/dihydrofolate synthase
scnpilot_solids1_trim150_scaffold_734_curated_14
unknown

Not on your lists

comp(13562..13726)
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034D5704
scnpilot_solids1_trim150_scaffold_734_curated_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13836..16367)
DNA (2532bp) protein (844aa)
Heavy metal translocating P-type ATPase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLL6_9GAMM
copper/silver-translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EIM02091.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_734_curated_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16364..16789)
DNA (426bp) protein (142aa)
Putative MerR family Zn(II)-responsive regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6E5_9GAMM
Putative MerR family Zn(II)-responsive regulator {ECO:0000313|EMBL:EIL95036.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative transcriptional regulator
scnpilot_solids1_trim150_scaffold_734_curated_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17009..17461
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6E4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95035.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_734_curated_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17493..18773
DNA (1281bp) protein (427aa)
Small-conductance mechanosensitive ion channel n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6E3_9GAMM
Small-conductance mechanosensitive ion channel {ECO:0000313|EMBL:EIL95034.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
mechanosensitive ion channel protein MscS
scnpilot_solids1_trim150_scaffold_734_curated_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18786..20225)
DNA (1440bp) protein (480aa)
GntR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6E2_9GAMM
GntR family transcriptional regulator {ECO:0000313|EMBL:EIL95033.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator with HTH domain and aminotransferase domain
scnpilot_solids1_trim150_scaffold_734_curated_20
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20317..21114
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLL3_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_734_curated_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21124..21597
DNA (474bp) protein (158aa)
Cupin domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6E0_9GAMM
Cupin domain-containing protein {ECO:0000313|EMBL:EIL95031.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cupin domain-containing protein
scnpilot_solids1_trim150_scaffold_734_curated_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21712..22116
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6D9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95030.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glyoxalase
scnpilot_solids1_trim150_scaffold_734_curated_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22157..22507)
DNA (351bp) protein (117aa)
Transcription regulator protein, arsenical resistance operon repressor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6D7_9GAMM
Transcription regulator protein, arsenical resistance operon repressor {ECO:0000313|EMBL:EIL95028.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative transcriptional regulator
scnpilot_solids1_trim150_scaffold_734_curated_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22525..23382)
DNA (858bp) protein (286aa)
Arsenical-resistance protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLL0_9GAMM
arsenical-resistance protein
Arsenical-resistance protein {ECO:0000313|EMBL:AGG88558.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 24 items

View Taxonomy