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scnpilot_solids1_trim150_scaffold_13072_curated_1

Organism: solids_Rhodanobacter_6

partial RP 8 / 55 BSCG 9 / 51 ASCG 2 / 38
Location: 2..115

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 37.0
  • Bit_score: 77
  • Evalue 1.30e-12
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 37.0
  • Bit_score: 77
  • Evalue 5.70e-12
DNA-directed RNA polymerase subunit omega n=3 Tax=Rhodanobacter RepID=I4WVX7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 37.0
  • Bit_score: 77
  • Evalue 4.10e-12

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 114
CAGGCCACGATCGACCAGATCGACAAGGCCGAGCGCGAGCGCGCCGAGCGCGAAGCGCTGGAGTGGGCCGCCGCGGAAGTCGACGACGACCTTTCCAAGGGCGGCGACGACTGA
PROTEIN sequence
Length: 38
QATIDQIDKAERERAEREALEWAAAEVDDDLSKGGDD*