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scnpilot_solids1_trim150_scaffold_5186_curated_2

Organism: solids_Rhodanobacter_6

partial RP 8 / 55 BSCG 9 / 51 ASCG 2 / 38
Location: comp(877..2760)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5F3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 627.0
  • Bit_score: 1200
  • Evalue 0.0
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 627.0
  • Bit_score: 1200
  • Evalue 0.0
protein-export membrane protein, SecD/SecF family similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 627.0
  • Bit_score: 1129
  • Evalue 0.0

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1884
ATGAGTGATTTTCCTCGCTGGAAGTACGCGCTGGTCGCGCTGGTGATGTTGTGCGGCGTGATCTACGCGCTGCCGAACGCCTTCCCGCCGGTGCCGGCGGTACAGGTCACCGCGAACCGCGATGCGCCGCCGATCAACACCGCCTTCCAGCAGAAGGTGGAAGCCGGGCTGAGGGCGAAGAAGATCGCCGTGAACGAGGTCTTCGTGGAAGGCGACCACCTGCTGGTGACGTTCGCCAACTCCGACGTGCAGAAGACCGGCTCCGACGAGATCAAGGCCTTGGTGGGCGACGGCTACACGGTCGCGTTCAAGCTGCAGTCCAATGTGCCGCACTGGCTGGGCGTGATCGGTGCCCGCTCGATGCCGCTGGGCCTGGACTTGCAAGGTGGCGTGCACTTCCTGATGCAGGTCGACCAGAAGGACGTCATCGAGAAGCAGGAAAACAGCTACGCCGATGACGTGCGCAGCCTGTTGCGCCAGAAGAACATCCGCTACGAGTCGGTCACCCGCAGCGCGGTCAATGGCCAGGGCATCTCGGTGATCCTGCGCTCGGCCGACGACCGCAAGACCGCGTCCGACGCGATCGCCAACGAATACACCGACCTCAACGTGTCCGACGGCGCCAGCACCGGCGACCGCTTCATGCTGAAGGTGACGGTCAAGCCGGAAAAACTGCGCGAACTGGCCCGCGGTGCGATCACCCAGAACCTGGGCACGCTGCGCAACCGCATCAACGCGCTTGGCGTGTCCGAGCCGCTGATCCAGCAGCAGGGCGACAGCCGCATCGTGGTCGAGCTGGCCGGCGTGCAGGACCCGACCGAAGCGAAGAAACTGATCGGCGCGGTGGCTACCCTGCAGTACCGCCCCGGCATCGGCCAGCCTGGCGATGCGCGTGCGGTGGAAGCGGCGCGCACCGGCAACATCCCGCCGGATGCCAACCTGTATTACATGCGTGGCGACAACCGCCCGGTGCTGGTCAGCAAGCAGATCATCGTGACCGGCAACCAGCTGATCGACGCCTCTTCCGGCATCGACCAGAACAGCGGCACGCCGAAGGTCGACGTGACCCTGAACGCCGCCGGCGCCCGCAAGATGGGCGACTTCACCAACGCCAATGTCGGCAAGCCGATGGCGGTGGTGTACGTGGAGCAGGTCTACGAGACCAAGGTCGTCGACGGCAAGGAAGTGCGCGTGCCCAAGATCACCGAGACGGTGATCAACGACGCGACCATCCAGGGCGCCTTCAGCAAGCAGTTCCAGACCAGCGGCCTGGGCAGTCCGAAAGAGGCATCCGACCTGGCCCTGCTGCTCAAGGGCGGCGCGCTGGCCGCACCGATGGACATCGTCGAGGAAGGCGTGATCGGCGCCAGCCTCGGCCAGGACAACATCGACAAGGGCTTCAAGGCGGTGCTGCTGGGCCTGGCGCTGGTGCTGCTGGCCGCGGCGATCTACTACAAGCTGTTCGGCCTGGTGGCGGACATCGCGCTGTTTTTCAACCTGGTGATCCTGGTGGCGGTGATGTCGCTGATCGGCGTCACCCTGACCATGCCCGGCGTGGCCGGCATCGTGCTGACCCTGGGCATGGCGATCGATGCGAACGTGCTGATCTGCGAACGCGTGCGTGAGGAACTGCGCAACGGCTCCAGTCCGCACGCCTCGATCCGCGCCGGTTACGAGAAGGCCTGGTCGACCATTCTGGATGCGAACGTCACCCACCTGATCGCGGCGCTGGCACTGACCACGATGGGTACCGGTGCGATCAAGGGCTTCGGTGTGACCCTGCTGATCGGCATCCTGACTTCGCTGTTCACCTCGGTGACGTTGACGCACGCGTTCACCGCGGCGATCCACGGTCATCGCAAGCTCAAGACGCTGTCGGTCTAA
PROTEIN sequence
Length: 628
MSDFPRWKYALVALVMLCGVIYALPNAFPPVPAVQVTANRDAPPINTAFQQKVEAGLRAKKIAVNEVFVEGDHLLVTFANSDVQKTGSDEIKALVGDGYTVAFKLQSNVPHWLGVIGARSMPLGLDLQGGVHFLMQVDQKDVIEKQENSYADDVRSLLRQKNIRYESVTRSAVNGQGISVILRSADDRKTASDAIANEYTDLNVSDGASTGDRFMLKVTVKPEKLRELARGAITQNLGTLRNRINALGVSEPLIQQQGDSRIVVELAGVQDPTEAKKLIGAVATLQYRPGIGQPGDARAVEAARTGNIPPDANLYYMRGDNRPVLVSKQIIVTGNQLIDASSGIDQNSGTPKVDVTLNAAGARKMGDFTNANVGKPMAVVYVEQVYETKVVDGKEVRVPKITETVINDATIQGAFSKQFQTSGLGSPKEASDLALLLKGGALAAPMDIVEEGVIGASLGQDNIDKGFKAVLLGLALVLLAAAIYYKLFGLVADIALFFNLVILVAVMSLIGVTLTMPGVAGIVLTLGMAIDANVLICERVREELRNGSSPHASIRAGYEKAWSTILDANVTHLIAALALTTMGTGAIKGFGVTLLIGILTSLFTSVTLTHAFTAAIHGHRKLKTLSV*