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scnpilot_solids1_trim150_scaffold_4950_curated_3

Organism: solids_Rhodanobacter_6

partial RP 8 / 55 BSCG 9 / 51 ASCG 2 / 38
Location: comp(1909..2697)

Top 3 Functional Annotations

Value Algorithm Source
Virulence protein SciE type n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0S1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 263.0
  • Bit_score: 468
  • Evalue 4.30e-129
Virulence protein SciE type {ECO:0000313|EMBL:EIL93062.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 263.0
  • Bit_score: 468
  • Evalue 6.10e-129
sciE; hypothetical protein; K11898 type VI secretion system protein ImpE similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 259.0
  • Bit_score: 292
  • Evalue 1.70e-76

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGACACCCGAAAGCAAGCTCAAAGAAGGCCGGCCGGACGAAGCGTTGCAACTGCTCACGGCGGAAGTACGCAACAACCCGGCAGATGCCAAGCGCCGGGTTTTTTTATTCCAGTTGCTGGCGCTGCTCGGACAATGGGAGCGGGCACAGAACCAGCTCAGCGTCTGCGGCGAACTCGACCCGCTCAACGCCATGATGGTCGGTGCCTATTCGGAGGCGCTGAAGGGCGAACTGGTGCGCGCCGACGTCTTCGCCGGCAAACGCATGCCGGTGATCATCGGCGAGCCGGAACCCTGGCTGGCGTGGCTGCTGCAATCGCTCAAGCTCGGCGCCGAAGGCAGGCACGAGCAGGCCGCGACGCTGCGCGAGCAGGCACTGGAACAGGCTCCCGCGGTGGCGGGCAACATCGACGGCGCCGCGTTCGAGTGGATCGCCGATGCCGACCCCCGCATCGGGCCGTGCCTGGAGATCATCGTCAACGGCGGCTACTCCTGGGTACCGTTCTCGCGCCTGCGCGAGCTGAAATTCGAGGCCCCGAGTGATCTGCGCGACAAGATCTGGGTGCCCACCCAGGTGACATGGAGCAATGGCGGCCAGGCCATCGGCTTCATTCCGGGGCGTTACGCCGGCAGCGAACGGTCCGAGGACCAGGACATCGTGCTCGGGCGCAAGACCGACTGGGTGGAGCAGGGCAGCGACCAGATCGGTCTGGGACAGCGCATGCTGGCCACCGACGTGGCCGACTATCCGCTGCTCGACGCGCGACTGATCACCTTCGACGTCGCCTGA
PROTEIN sequence
Length: 263
MTPESKLKEGRPDEALQLLTAEVRNNPADAKRRVFLFQLLALLGQWERAQNQLSVCGELDPLNAMMVGAYSEALKGELVRADVFAGKRMPVIIGEPEPWLAWLLQSLKLGAEGRHEQAATLREQALEQAPAVAGNIDGAAFEWIADADPRIGPCLEIIVNGGYSWVPFSRLRELKFEAPSDLRDKIWVPTQVTWSNGGQAIGFIPGRYAGSERSEDQDIVLGRKTDWVEQGSDQIGLGQRMLATDVADYPLLDARLITFDVA*