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scnpilot_solids1_trim150_scaffold_928_curated

Search features with annotation key words

Displaying items 31-60 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_928_curated_31
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27198..28877
DNA (1680bp) protein (560aa)
Putative aminopeptidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NF86_9GAMM
Putative aminopeptidase {ECO:0000313|EMBL:AGG89540.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
putative aminopeptidase
scnpilot_solids1_trim150_scaffold_928_curated_32
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28899..31646)
DNA (2748bp) protein (916aa)
Putative lipoprotein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWT3_9GAMM
Zinc carboxypeptidase
Zinc carboxypeptidase {ECO:0000313|EMBL:AGG89539.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_928_curated_33
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31847..33847)
DNA (2001bp) protein (667aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIQ1_9GAMM
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:AGG89538.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
scnpilot_solids1_trim150_scaffold_928_curated_34
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33988..36291)
DNA (2304bp) protein (768aa)
Glutamate carboxypeptidase II n=1 Tax=Rhodanobacter denitrificans RepID=I4WWT1_9GAMM
Putative aminopeptidase {ECO:0000313|EMBL:AGG89537.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
putative aminopeptidase
scnpilot_solids1_trim150_scaffold_928_curated_35
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36288..37718)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NPG4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89536.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_928_curated_36
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37928..38701
DNA (774bp) protein (258aa)
Putative methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NF83_9GAMM
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:AGG89535.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_928_curated_37
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38969..39466
DNA (498bp) protein (166aa)
GCN5-related N-acetyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD65_9GAMM
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EIL97406.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative acyltransferase
scnpilot_solids1_trim150_scaffold_928_curated_38
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39586..42030
DNA (2445bp) protein (815aa)
Peptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WK24_9GAMM
Peptidase {ECO:0000313|EMBL:EIL99815.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_928_curated_39
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42124..42837
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWS5_9GAMM
Ion channel
Ion channel {ECO:0000313|EMBL:AGG89533.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_928_curated_40
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42862..43890)
DNA (1029bp) protein (343aa)
Putative signal transduction protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD63_9GAMM
Putative signal transduction protein {ECO:0000313|EMBL:EIL97404.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative signal transduction protein
scnpilot_solids1_trim150_scaffold_928_curated_41
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43994..44098)
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPA2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89043.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_928_curated_42
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44267..45286
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD61_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97402.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
luciferase family oxidoreductase, group 1
scnpilot_solids1_trim150_scaffold_928_curated_43
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45320..46177
DNA (858bp) protein (286aa)
Serine/threonine protein kinase involved in cell cycle control n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD60_9GAMM
Serine/threonine protein kinase involved in cell cycle control {ECO:0000313|EMBL:EIL97401.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
serine/threonine protein kinase involved in cell cycle control
scnpilot_solids1_trim150_scaffold_928_curated_44
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46306..46740)
DNA (435bp) protein (145aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD59_9GAMM
FKBP-type peptidyl-prolyl cis-trans isomerase
scnpilot_solids1_trim150_scaffold_928_curated_45
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46815..47372)
DNA (558bp) protein (186aa)
YaeQ protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD58_9GAMM
YaeQ protein {ECO:0000313|EMBL:EIL97399.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_928_curated_46
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47501..49510
DNA (2010bp) protein (670aa)
Oligopeptide transporter, OPT family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD57_9GAMM
Oligopeptide transporter, OPT family protein {ECO:0000313|EMBL:EIL97398.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative oligopeptide transporter, OPT family
scnpilot_solids1_trim150_scaffold_928_curated_47
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49575..50645
DNA (1071bp) protein (357aa)
16S RNA G1207 methylase RsmC n=1 Tax=Rhodanobacter denitrificans RepID=I4WWR3_9GAMM
16S RNA G1207 methylase RsmC
16S RNA G1207 methylase RsmC {ECO:0000313|EMBL:AGG89521.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_928_curated_48
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50642..51346
DNA (705bp) protein (235aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
pseudouridine synthase family protein (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD53_9GAMM
scnpilot_solids1_trim150_scaffold_928_curated_49
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51379..51864
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD52_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97393.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_928_curated_50
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51874..52206)
DNA (333bp) protein (111aa)
Putative Fe-S oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWR1_9GAMM
putative Fe-S oxidoreductase
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:AGG89519.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_928_curated_51
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52265..52855)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NIN9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89518.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_928_curated_52
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53233..54276
DNA (1044bp) protein (348aa)
Transglycosylase family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NPE8_9GAMM
transglycosylase family protein
Transglycosylase family protein {ECO:0000313|EMBL:AGG89516.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_928_curated_53
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54367..55926
DNA (1560bp) protein (520aa)
UPF0061 protein R2APBS1_2424 n=1 Tax=Rhodanobacter denitrificans RepID=M4NF71_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_928_curated_54
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56279..57814
DNA (1536bp) protein (512aa)
NAD-dependent aldehyde dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFC1_9GAMM
NAD-dependent aldehyde dehydrogenase
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:AGG89514.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_928_curated_55
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57903..58205
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWQ6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89513.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_928_curated_56
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58213..58974
DNA (762bp) protein (254aa)
Putative short chain dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWQ5_9GAMM
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89512.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_928_curated_57
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59126..60163
DNA (1038bp) protein (346aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD42_9GAMM
dihydroorotate dehydrogenase, subfamily 2
scnpilot_solids1_trim150_scaffold_928_curated_58
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60153..61202
DNA (1050bp) protein (350aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFB8_9GAMM
scnpilot_solids1_trim150_scaffold_928_curated_59
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61964..63214)
DNA (1251bp) protein (417aa)
Nitrate/nitrite transporter n=1 Tax=Rhodanobacter denitrificans RepID=M4NIN3_9GAMM
nitrate/nitrite transporter
Nitrate/nitrite transporter {ECO:0000313|EMBL:AGG89508.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_928_curated_60
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63464..65626
DNA (2163bp) protein (721aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Polyphosphate kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHF3_9GAMM
polyphosphate kinase 1
Displaying items 31-60 of 79 in total

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