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scnpilot_solids1_trim150_scaffold_928_curated_9

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(5435..6691)

Top 3 Functional Annotations

Value Algorithm Source
Glycine betaine/carnitine/choline-binding ABC transporter substrate-binding and permease component n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD93_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 413.0
  • Bit_score: 735
  • Evalue 3.00e-209
Glycine betaine/carnitine/choline-binding ABC transporter substrate-binding and permease component {ECO:0000313|EMBL:EIL97434.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 413.0
  • Bit_score: 735
  • Evalue 4.20e-209
periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 413.0
  • Bit_score: 730
  • Evalue 2.30e-208

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGATGCGCTGCCTGCTGGGCGCACTGATCCTGCTGCTGGGCAGCGGCCTGCTGCCCGCGCCGACGCAGGCCGCGCCGGTGCGCATCGGTTCCAAGCAGTTCACCGAGTCGGTGATCCTCGGCGAACTGGCGCTGGCCGGCGCGCGCGAGGCCGGCGTCGAGGCGGTGCACCGGCGCGAACTGGGCGGCACCCGCATCCTGTGGCGCGCCCTGCTCGACGGCGAGATCGACGCCTATCCCGAATACACCGGCACGCTCACCCAGGAACTGCTGCAAGGCCTGCCGGCGAACGCGGACATCGCCAGCCTGCGCGCGCAACTCAAGCCGCTGGGCATCGGCATCACCGACTCGCTCGGCTTCAGCGACACCTATGCGATCGGCATGCGCGATGACGTCGCCGCGCGGCTGGACATCCGCGACATTTCCCACCTGCGGCGACACCCCGCCCTGCGCTTCGGCTTTTCCAACGAGTTCATGGACCGCGGCGACGGCTGGCCCGGCCTGCGCCAACGCTACGGCTTGCCGCAGGCCAACGTGAGCGGCCTCGACCACGCGCTGTCGTACCGCGCGGTGGCCAGCGGCGCGGTCGACGCGATCGACCTGTACAGCACCGACGCGGAGATTCCCTACTACCACCTGCGCACGCTGCGCGACGACCGCCAGTACTTCCCGCGCTACGAGGCGGTCTACCTGTACCGCCTGGCGCTGGCGCAGAGCGCGCCCGCCTTCGTCGGCGCGCTGCGCAAGCTTGCCGGCAGCATCGACGAGGACGCCATGCGCGCGATGAACGCGCGAGTGAAGCTGCGCGGCGTGAAGGAAAACGTGGTGGCGGCCGATTTCCTCGGCATCCACGCGCACGACCAGGGCGGCGGCGTGGGGGCGCAGCTGCTCCAGCGCAGCGTCGAGCACCTCCGGCTGGTGGCGATCTCGCTGGGGCTGGCGATCCTGCTGGCGGTCCCGCTGGGCATCCTGGCGGCCCGGCGGCGGCGCCTCGGCCAGTGGCTGATCGGCCTGACCGGCATCCTGCAGACGGTGCCGTCGCTGGCGATGTTCGTGTTCATGATCCCGCTGCTCGGCATCGGCACCTGGCCGGCGATCGCCGCGCTATTCCTGTACAGCCTGCTGCCGATCGTGCGCAACACGCACGCCGGCCTGGTCGGCATCGCGCCGGAACTGCGCGAATCGGCCGCCGCGCTGGGGCTGCCGCCCGGCGTGCGGCTGCGCTGGGTTGAGTTGCCGCTGGCGACGCGGCGGTGA
PROTEIN sequence
Length: 419
MMRCLLGALILLLGSGLLPAPTQAAPVRIGSKQFTESVILGELALAGAREAGVEAVHRRELGGTRILWRALLDGEIDAYPEYTGTLTQELLQGLPANADIASLRAQLKPLGIGITDSLGFSDTYAIGMRDDVAARLDIRDISHLRRHPALRFGFSNEFMDRGDGWPGLRQRYGLPQANVSGLDHALSYRAVASGAVDAIDLYSTDAEIPYYHLRTLRDDRQYFPRYEAVYLYRLALAQSAPAFVGALRKLAGSIDEDAMRAMNARVKLRGVKENVVAADFLGIHAHDQGGGVGAQLLQRSVEHLRLVAISLGLAILLAVPLGILAARRRRLGQWLIGLTGILQTVPSLAMFVFMIPLLGIGTWPAIAALFLYSLLPIVRNTHAGLVGIAPELRESAAALGLPPGVRLRWVELPLATRR*