ggKbase home page

scnpilot_solids1_trim150_scaffold_333_curated_33

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: 34068..34886

Top 3 Functional Annotations

Value Algorithm Source
IclR family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ75_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 272.0
  • Bit_score: 488
  • Evalue 3.20e-135
IclR family transcriptional regulator {ECO:0000313|EMBL:EIL99516.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 272.0
  • Bit_score: 488
  • Evalue 4.50e-135
beta-ketoadipate pathway transcriptional regulator, PcaR/PcaU/PobR family similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 272.0
  • Bit_score: 459
  • Evalue 6.60e-127

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGGCATCGACAGCATTCGAGGACAGCGCGGACTACGTGCAATCGCTGGCGCGCGGCCTCAGGGTGCTGCGCGCGTTCGATCGCGAGTTGCCCAGCCCGAGCCTGTCCGAGGTCGCCGAGCGCACCGGCCTGTCGCGCGCGGTGGTGCGCCGAAGCCTGCTGACCCTGCAGCACCTGGGCTACGTCGGCAGCCGCGGCCGCAACTTCTTCCTGACCCCGCGCGTGCTGGAGCTGGGCTACAGCTACCTCACTTCGCTGGACCTGACCGAACTGGCGCAGCAGAGCATGGAGAGGCTGTCGCAGCAGGTCGGCGAATCGTGCTCGATGGCGGTGCTCGACGGCAGCGACATCGTCTATGTGCTGCGCGTGCCGGTACGCCGGGTGATGAGCCTGGCGCTGGGCGTTGGCGCGCGCCTGCCGGCGTTCGTGGCTTCGCTGGGGCGGGTGATGCTGGCGGACCTGCCCGATACCGCACTGACCGCCTGGCTGCGCGGGCAGAAGTTCCGCGCCTACACCCCGCAGACGATCCACAGCGCCAGCGCGCTGAAGGCGGAACTGCGGCGCGTGCGCGAGCAGGGCTACGCGCTGGTCTCCCGCGAGCTCGAGTCCGGCCTGTGTTCGATCGCGGTGCCGATCCATGCCGGCGACGGCCGGGTGGTCGCCGCGTTGAACGTGGGCATGCCGTACAGCGAGGACGCGCCCGCGCGCGCGGTGCAGCAGATCCTGCCGGCCATGCGCGAGGCGCAGCGCGCCATCGAGCAGGCGATCCGGCGCGGCGGCTGGCTGCCGCACCTGGCGATGAAGCACGCCTATGAGTAG
PROTEIN sequence
Length: 273
MASTAFEDSADYVQSLARGLRVLRAFDRELPSPSLSEVAERTGLSRAVVRRSLLTLQHLGYVGSRGRNFFLTPRVLELGYSYLTSLDLTELAQQSMERLSQQVGESCSMAVLDGSDIVYVLRVPVRRVMSLALGVGARLPAFVASLGRVMLADLPDTALTAWLRGQKFRAYTPQTIHSASALKAELRRVREQGYALVSRELESGLCSIAVPIHAGDGRVVAALNVGMPYSEDAPARAVQQILPAMREAQRAIEQAIRRGGWLPHLAMKHAYE*