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scnpilot_solids1_trim150_scaffold_22901_curated_3

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(1031..1594)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Rhodanobacter denitrificans RepID=I4WYC2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 187.0
  • Bit_score: 357
  • Evalue 7.70e-96
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 94.7
  • Coverage: 187.0
  • Bit_score: 356
  • Evalue 7.00e-96
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGG89686.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 187.0
  • Bit_score: 356
  • Evalue 3.10e-95

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
AGCCCCGAGGAACGCGCCGCCTTCCTGCTGCGCGAAGTGTTCGACTACAGCCACGCCGAAACGGCCGCGATGCTGGAAATCAGCGAAGACGCCTGCCGCCAGCGCGTGCACCGGGCGAAGCAGCGGCTGCGCGAGGATCGCCCGCGCCAGGTAATGCCGAACATCGACACCCAGCGGCGGCTGCTCGAACGCTTCATGCAGGCGCTGCAGCAGCCGGACATGCCCACCCTGCGCGCCCTGTTTGCCGAAGACGCCACGAGCGTCTCCGACGGCGGCGGCCTGGCGCGGGCCACCCTGCACCCGCTGCACGGCGCCGAACGGCTGGCCCGGTTGTACATGCAGATCGCGCTGCAGCAACAGCGTCACGGTGGCGTGCGCTACGAGATCCATCAGCTCAATGGCATGCCGGCCCTGCTCGGCTGGCATGGCGACACGCTGGTCTCGGCCAGCTGGATCGACGACGACGGCGAGCGCATCACCGCGGTGCACGCCTTGCGCCACCCCGGCAAGCTTGCCCGGCTGGCGGCAGTCACGAAGTCGGGGTCTGCCGCGTCCTTGCACTGA
PROTEIN sequence
Length: 188
SPEERAAFLLREVFDYSHAETAAMLEISEDACRQRVHRAKQRLREDRPRQVMPNIDTQRRLLERFMQALQQPDMPTLRALFAEDATSVSDGGGLARATLHPLHGAERLARLYMQIALQQQRHGGVRYEIHQLNGMPALLGWHGDTLVSASWIDDDGERITAVHALRHPGKLARLAAVTKSGSAASLH*