ggKbase home page

scnpilot_solids1_trim150_scaffold_770_curated_22

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(27231..27899)

Top 3 Functional Annotations

Value Algorithm Source
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 222.0
  • Bit_score: 421
  • Evalue 9.40e-115
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1) similarity KEGG
DB: KEGG
  • Identity: 95.0
  • Coverage: 222.0
  • Bit_score: 420
  • Evalue 3.60e-115
Ribulose-phosphate 3-epimerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN98_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 222.0
  • Bit_score: 421
  • Evalue 6.70e-115

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGGCCAAGCAAGCTCCCGTCATCGCCCCGTCCATCCTCGCCGCCGATTTCGCCCGGCTTGGCGAAGACACCGCCGCCGCGCTCGCCGCCGGCGCCGACTGGGTGCACTTCGACGTGATGGACAACCATTACGTACCGAACCTGACGATCGGCCCGATGGTGCTGCAGTCGCTGCGCAAGTACGGCATCACCGCACCGATCGACGTGCACCTGATGGTCAAGCCGGTCGACCGCATCGTGCCGGACTTCGCCAAGGCCGGCGCCAGCCTGATCAGCTTCCACCCGGAGGCGAGCGAGCACATCGACCGCACGCTGGGCCTGATCAGGGAGTCGGGCTGCCAGGCCGGGCTGGTGTTCAACCCGGCCACGCCGCTGGACTACCTCGACTACGTGATGGACAAGCTCGACCTGATCCTGATCATGTCGGTGAATCCCGGCTTCGGCGGCCAGAAGTTCATCCCCGGCGCGCTGGAGAAACTGCGCCAGGCGCGCGCGCGCATCGACGCCAGCGGCCGCGCGATCCGGCTGGAGATCGACGGCGGCGTCACCGCGCAGAACATCGGCGCGATCGCCGCCGCCGGCGCCGACACCTTCGTGGCCGGCTCGGCGATCTTCCACGCGCCGGATTACCGGAAGGTCGTGGAAGACATGCGAGAGGCGATCGGGTAG
PROTEIN sequence
Length: 223
MAKQAPVIAPSILAADFARLGEDTAAALAAGADWVHFDVMDNHYVPNLTIGPMVLQSLRKYGITAPIDVHLMVKPVDRIVPDFAKAGASLISFHPEASEHIDRTLGLIRESGCQAGLVFNPATPLDYLDYVMDKLDLILIMSVNPGFGGQKFIPGALEKLRQARARIDASGRAIRLEIDGGVTAQNIGAIAAAGADTFVAGSAIFHAPDYRKVVEDMREAIG*