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scnpilot_solids1_trim150_scaffold_1955_curated_9

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(7254..8102)

Top 3 Functional Annotations

Value Algorithm Source
diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 278.0
  • Bit_score: 534
  • Evalue 2.20e-149
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 278.0
  • Bit_score: 534
  • Evalue 9.70e-149
Diaminopimelate epimerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NUA7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 278.0
  • Bit_score: 534
  • Evalue 6.90e-149

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGCAGCTGCGCTTCTCGAAAATGCACGGCATCGGCAACGACTTCGTCGTGCTGGATTGCCGCCAGCGCGCGTTTTCGCTGGACGCGGCGCAGATCCGCGCGCTGGCCGACCGCCATACCGGCGTGGGCTTCGACCAGCTGCTCAGCGTGGAGCCGGCGCGCAGCCCGGCCGGCACGTTCTACTACGGCATCTGGAATGCCGACGGCTCGCCGTCCGGCCAGTGCGGCAACGGCGTGCGCTGCGTGGCGGCATGGCTGCACCGCGCCGGCGCGCTGGCGATCGGCGCGGACGTGACGATCGAGAGCCCGTCCGGTCCGGTGACGGTGCGCCTGCTCGGCGCGAACGAGGTCGCCGTGGACATGGGCGAGCCGGTATTCGAGCCCAAGCGGATCCCGTTCGCGGCCGACGCCGCGGCCGATCGTTACGCGATCGACCTGGCCGGCGAGCGGCTGGACATCGGCGCGGTGTCGATGGGCAACCCGCACGCGGTGGTGGCGGTGGACGACCTGGCCGACCCCGTGCTGCAGCGGCTCGGCCCGCTGCTGACCAACCATCCGCGCTTCCCCCAAGGCGCCAACGCCGGCTTCGTGCAGCGGCTCGATCGCGGCCATCTGCGCCTGCGCGTGCACGAGCGCGGCGCCGGCTGGACGCTGGCCTGCGGCACCGGCGCCTGCGCCGCAATGGCGGTGTTGCGCCGGCGCGGCGAGGTCGACGACGCGGTGACGGTCGAGCTGCCCGGCGGCACGTTGCGCATCGACTGGGCCGGCCCCGGCCACGCGCTGTGGATGACCGGCCCGGCCGCGTTCGCGTTCGAGGGCGAGTGGCCGCTGCCGGACGCCGCCGCCTGA
PROTEIN sequence
Length: 283
MQLRFSKMHGIGNDFVVLDCRQRAFSLDAAQIRALADRHTGVGFDQLLSVEPARSPAGTFYYGIWNADGSPSGQCGNGVRCVAAWLHRAGALAIGADVTIESPSGPVTVRLLGANEVAVDMGEPVFEPKRIPFAADAAADRYAIDLAGERLDIGAVSMGNPHAVVAVDDLADPVLQRLGPLLTNHPRFPQGANAGFVQRLDRGHLRLRVHERGAGWTLACGTGACAAMAVLRRRGEVDDAVTVELPGGTLRIDWAGPGHALWMTGPAAFAFEGEWPLPDAAA*