ggKbase home page

scnpilot_solids1_trim150_scaffold_1018_curated_20

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(14847..17999)

Top 3 Functional Annotations

Value Algorithm Source
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMB2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 999.99
  • Bit_score: 1874
  • Evalue 0.0
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:EIM00604.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 999.99
  • Bit_score: 1874
  • Evalue 0.0
heavy metal efflux pump, cobalt-zinc-cadmium similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 999.99
  • Bit_score: 1862
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3153
ATGATCGCCGCGCTGATTCGCGCCGCGGTCGCGCACCGCGTGTTCGTGCTGCTGGCCGCGCTGGCGCTGGCCGCGGCCGGCGCGTTCTCGCTCGTGCGCACGCCGCTGGACGCCTTGCCGGACCTGTCCGATACCCAGGTGATCATCCGCACCAGTTGGGCTGGGCAATCGCCGCAGGTGGTCGAGGACCAGGTCACCTATCCGCTGGCCACCACCATGCTGTCGGTGCCCGGCGCCCGCACCGTGCGTGCGTATTCGTTCTTCGGCGACTCCTACGTCTACGTGCTGTTCGACGACGGCACTGACCTGTACTGGGCGCGCTCGCGCGTGCTGGAGTACCTCAGCCAGGTGCGCGACCGGCTGCCGGCCGGGGTGAATCCGTCGCTGGGCCCCGACGCCACCGGCCTGGGCTGGGTCTACGAATACGCCTTGGTCGACCGCAGCGGCAGGCACGACCTCGGCGAACTGCGCGCGCTGCAGGACTGGTTCCTGCGCTACCAGCTGAAGAGCGTGCCGGACGTGGCCGAAGTGGCCAGCCTCGGCGGCATGGAGCGCGCCTGGCAGATCGTGCCGGACCCGCAGGCGCTGGCCGCCCGCGGCATCACCGTGGCGCAGCTGGCGGACGCGGTGCGCGTGGCCAACGGCGCCAGCGGCGGCTCGGTGATCGAGCAGGGCGAGGCGGAGTTGATGGTGCGCAGCGAAGGCTATCTGCGCAGCCGCGCGGACTTCGAGAACGTGCCGGTTGCCACCGGCGCGAACGGCGTGCCGGTGCTGCTTCGCGAAATCGCCACGGTGCGGCGCGGGCCGAGCTTCCGGCGCGGCATCGCCGAACTGGACGGCCAGGGCGAAGTGGCCGGCGGCATCGTCGTGCTGCGCCCGGGCAAGAACGCGAAGGCCGCGATCGTGGCGGTCAAGGCGAAGCTGGCCGAACTCGGGCGCAGCCTGCCGGCCGGCGTCGAGATCGTGCCCACCTACGACCGTGCGCAGCTGATCGACGCGGCGGTGGACAACCTGTGGGGCAAGCTGCTGGAAGAGTTCCTGGTGGTCGCGCTGGTCTGCGTGCTGTTCCTGGGCCACCTGCGCTCGGCGCTGGTGGCGGTGGTCAGCCTGCCGCTGGGCGTGCTCGCCGCGTTCATCGCGCTGCACCTGCAGGGCGTGACGGCGAACCTGATGTCGCTCGGCGGCATCGCCATCGCGATCGGCGCGATGGTCGACGCGGCGGTGGTGATGATCGAGAACGCGCACAAGCACCTGGAGCACTGGCGCGACGCGCACGACGGCGAGGAACCGCAAGGCGCGGCGCGCTGGTCGCTGGTGGTCGAGGCGGCGGCAGAGGTGGGGCCGGCGCTGTTCGTCAGCCTGCTGATCATCGCGCTGTCGTTCATCCCGGTGTTCGCGCTGCAGGGGCAGGAAGGCAAGCTGTTCAAGCCGCTGGCGTTCACCAAGACCTACGCGATGGCGGCAGCGGCGGGCCTGGCGGTGACCCTGGTGCCGGTGCTGATGGGCTACCTGGTTCGCGGGCGCATTCGGCCGGAACACGCCAATCCGCTCAACCGCGGCCTGATCGCGTTGTACCGGCCGATCCTGGAAGCGGTGCTGCGCTATCCGAAGGCGACCCTGGCATTGGCCGGCCTGCTGATGCTCAGCGCGCTGCTGCCGCTCGGTCGGTTGGGCAGCGAATTCATGCCGGCGATGGACGAGGGCACGCTGCTGTACATGCCCACCGCGCTGCCGGGATTGTCCTCGGGCAAGGCCGCGCAACTGCTGCAGCTCACCGACCGCATGATCAAGACCGTGCCCGAGGTCGACCACGTGTTCGGCAAGGCCGGCCGCGCCGACACGGCCACCGATCCGGCGCCGATGGAGATGTTCGAGACCACCATCACCTTCAAGCCGAAGGACCAGTGGCGGCCGGGCATGACGATGGACAAGCTCAAGGCGGAGCTGGACCAGGCAGTGCGCGTGCCGGGCCTGACCAACCTGTTCGTGCCGCCGCTGCGCAACCGCATCGACATGCTGGCCACCGGCATCAAGAGCCCGATCGGCATCAAGGTGCTGGGCAACCGGGTCGACGAGCTGCAGGCGGTGGCCGACGCAGTCGAGGCGGTGGCACGCACCGTGCCGGGCGTGGGCTCGGCGATTGCCGAGCGCGCCGCCGCCGGGCGCTACGTGGACGTGCGCATCCGCCGCGCCGAGGCCGCGCGCTACGGGTTGAGCCAGCAGCAGCTGCAGCAGCTGATCGCCACCGTGGTCGGCGGCGAGCCGATCGGCGAGGTCGTCGCCGGACGCGAGCGTTATCCGATCGTGCTGCGCTACCCGCGCGCGGCGCGCGATTCGCTGGCCGCGCTGGAACAGCTGCCGATCGTCGCGCCGAACGGCGCGCAGCTGACCCTGGGGCAGGTGGCCGACATCGAGGTGGTGGCCGGGCCGCCGATGCTGAAAAGCGAGAACGGCCAGCTGGCGACCTACGTCTACGTCGATACCGCCGGCCGCGACCTGGGCGCGGCGGTGGCGGACCTGCAGCGCACGGTGGCGCGCGAGGTCCGCTTGCCGCCGGGTGTCACGCTGGCCTGGTCGGGCCAGTTCGAGTACCTGGCGCAGGCGATGCAGCGGCTGACCCTGGTGGTGCCGGTCGTGCTGCTGATCGTCTTCGTGCTGATCTACGCGGTGTTCCGCCGGATCAGCGAGGCGGCGCTGATCATGGCCAGCGTGCCGCTGGCGCTGGTCGGCGGGCTGTGGCTGATCTGGCTGCTGGGCCATGCGGTGTCGGTGGCGACGATGATCGGCTTCATCGCGCTGGCCGGCGTCGCCGCCGAGTTCGGCGTGGTGATGCTGCTGTACCTGCGCCACGCGTGGGACCGCCAGCTCGCCGCCGATCCGCGCTCGGGCCCGGCCGAACTGGACGCGGCGATCCGCGAAGGCGCGGTGCAGCGCGTGCGGCCGAAGGCCATGACGGTGGCGGTGATCCTGGCCGGCCTGTTGCCGATCCTGCTCGGCCACGGCGCCGGTTCGGAAGTGATGCAGCGCATCGCCGCGCCGATGGTCGGCGGCATGCTCACCGCGCCGCTGCTGTCGATGCTGGTGATCCCCGCCGCGTTCCGATTGCTGGTGCGGCATCGGCTGCGCGGGGCCGACACGACCGGAGTAGGGTGA
PROTEIN sequence
Length: 1051
MIAALIRAAVAHRVFVLLAALALAAAGAFSLVRTPLDALPDLSDTQVIIRTSWAGQSPQVVEDQVTYPLATTMLSVPGARTVRAYSFFGDSYVYVLFDDGTDLYWARSRVLEYLSQVRDRLPAGVNPSLGPDATGLGWVYEYALVDRSGRHDLGELRALQDWFLRYQLKSVPDVAEVASLGGMERAWQIVPDPQALAARGITVAQLADAVRVANGASGGSVIEQGEAELMVRSEGYLRSRADFENVPVATGANGVPVLLREIATVRRGPSFRRGIAELDGQGEVAGGIVVLRPGKNAKAAIVAVKAKLAELGRSLPAGVEIVPTYDRAQLIDAAVDNLWGKLLEEFLVVALVCVLFLGHLRSALVAVVSLPLGVLAAFIALHLQGVTANLMSLGGIAIAIGAMVDAAVVMIENAHKHLEHWRDAHDGEEPQGAARWSLVVEAAAEVGPALFVSLLIIALSFIPVFALQGQEGKLFKPLAFTKTYAMAAAAGLAVTLVPVLMGYLVRGRIRPEHANPLNRGLIALYRPILEAVLRYPKATLALAGLLMLSALLPLGRLGSEFMPAMDEGTLLYMPTALPGLSSGKAAQLLQLTDRMIKTVPEVDHVFGKAGRADTATDPAPMEMFETTITFKPKDQWRPGMTMDKLKAELDQAVRVPGLTNLFVPPLRNRIDMLATGIKSPIGIKVLGNRVDELQAVADAVEAVARTVPGVGSAIAERAAAGRYVDVRIRRAEAARYGLSQQQLQQLIATVVGGEPIGEVVAGRERYPIVLRYPRAARDSLAALEQLPIVAPNGAQLTLGQVADIEVVAGPPMLKSENGQLATYVYVDTAGRDLGAAVADLQRTVAREVRLPPGVTLAWSGQFEYLAQAMQRLTLVVPVVLLIVFVLIYAVFRRISEAALIMASVPLALVGGLWLIWLLGHAVSVATMIGFIALAGVAAEFGVVMLLYLRHAWDRQLAADPRSGPAELDAAIREGAVQRVRPKAMTVAVILAGLLPILLGHGAGSEVMQRIAAPMVGGMLTAPLLSMLVIPAAFRLLVRHRLRGADTTGVG*