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scnpilot_solids1_trim150_scaffold_562_curated_24

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(28897..30267)

Top 3 Functional Annotations

Value Algorithm Source
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54) similarity KEGG
DB: KEGG
  • Identity: 93.6
  • Coverage: 455.0
  • Bit_score: 867
  • Evalue 2.30e-249
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL42_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 456.0
  • Bit_score: 872
  • Evalue 1.70e-250
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EIM00184.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 456.0
  • Bit_score: 872
  • Evalue 2.40e-250

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGAAGCCTGCCGCGCCCGACCTCCACGCCCCCGTCGACTGGGCGCCCGATTCGTGGCAGCGGCGTGTGGCGCTGCAGCAACCGCATTACGACGACGCGGCCGAGCTTGCCGCCGCCGGCATCCAGTTGGCCCGGTTGCCGCCGCTGGTCACCTCGTGGGAAGTACTGGCGCTGAAGCAGGCGCTCGCCGAGGCGCAAGAGGGCGACCGCTTCCTGTTGCAGGGCGGCGATTGCGCGGAGAGCTTCGCCGACTGCACCAGTCCGGTGATTTCGAACCGGCTCAAGGTGCTGCTGCAGATGAGCCTGGTGCTGGTGCACGGGCTGAAGAAGCCGGTGCTGCGGGTTGGCCGTTTCGCCGGGCAATACGCCAAGCCGCGTTCGGCCGACCACGAGGTCCGCGATGGCGTGAGCCTGCCGAGTTTCCGCGGCGACGTGGTCAACGGCCCGGAGTTCACCGCTGCTGCGCGCCGGCCGGATCCGCAGCGGCTGATCCAGGCGCATGCGCACTCGGCGCTGACCATGAACTTCGTACGCGCGCTGATCGACGGCGGCTTCGCCGACCTGCACCATCCGGAATACTGGGACCTGGCCTGGGTCGAGCATTCGCCGCTGGCCGCCGAGTATCGCCAGATGGTGGCCGCCATCGGCGATTCGCTGCGCTTCATGGAAACCCTGGCCGGGCCGATCGCCGGTTTCTCCAAGGTGGATTTCTTCACCTCGCACGAGGCGCTGCTGCTGCACTACGAGCAGGCGCTGACCCGCCAGGTGCCGCGCCATCCCGGCTGGTTCAACCTGTCCACCCACTTTCCATGGATCGGCATGCGCACCGCGGCGCTGGACGGCGCCCACGTGGAGTATTTCCGCGGCATCCGCAACCCGGTGGCGGTGAAGATCGGTCCGTCGGTGGCGCCGGAGCAGTTGCTGCCGCTGATCGACGCGTTGAATCCGCACGACGAGCCGGGCCGGCTGACCCTGATCCACCGCATGGGCAACGCGAGGATCGCCGCCGCGCTGCCGCCGCTGCTGGAGGCGGTCAAGCGCGAGGGCCGGCGCGTGCTGTGGGTGGCCGATCCGATGCACGGCAACACCGAGAGCACCTCGAACGGGCACAAGACCCGCCGTTTCGACAACATCCGCGGCGAGCTCGACCAGGCCTTCGATATCCACGCCGCCGTCGGCACGCGGCTGGGTGGCGTGCACCTGGAGCTGACCGGCGAGGACGTCACCGAGTGCATGGGTGGTGCGCGCGACCTGTCCGAGAGCGACCTCGACCGTGCCTACAAGTCGATGGTCGACCCGCGCCTGAACTACGAGCAGTCGCTGGAGCTGGCCATGCTGATCGTGCGCAAGTCTGTCAACGGTCAGGGCTGA
PROTEIN sequence
Length: 457
MKPAAPDLHAPVDWAPDSWQRRVALQQPHYDDAAELAAAGIQLARLPPLVTSWEVLALKQALAEAQEGDRFLLQGGDCAESFADCTSPVISNRLKVLLQMSLVLVHGLKKPVLRVGRFAGQYAKPRSADHEVRDGVSLPSFRGDVVNGPEFTAAARRPDPQRLIQAHAHSALTMNFVRALIDGGFADLHHPEYWDLAWVEHSPLAAEYRQMVAAIGDSLRFMETLAGPIAGFSKVDFFTSHEALLLHYEQALTRQVPRHPGWFNLSTHFPWIGMRTAALDGAHVEYFRGIRNPVAVKIGPSVAPEQLLPLIDALNPHDEPGRLTLIHRMGNARIAAALPPLLEAVKREGRRVLWVADPMHGNTESTSNGHKTRRFDNIRGELDQAFDIHAAVGTRLGGVHLELTGEDVTECMGGARDLSESDLDRAYKSMVDPRLNYEQSLELAMLIVRKSVNGQG*