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scnpilot_solids1_trim150_scaffold_258_curated_31

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 38854..39426

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7F4_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 39.1
  • Coverage: 192.0
  • Bit_score: 129
  • Evalue 3.50e-27
Uncharacterized protein {ECO:0000313|EMBL:KIA96690.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.5
  • Coverage: 184.0
  • Bit_score: 133
  • Evalue 4.40e-28
RNA polymerase, sigma-24 subunit, ecf subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 192.0
  • Bit_score: 129
  • Evalue 1.10e-27

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Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 573
TTGAATAATAATCATTCTTACGATGAATATCTTTTATTCCAGCGGATCACCTGGGGAGACGAGGAGGCATTTCGCGAGGTAGTGTATTATTATTCTCCAAAACTGATCTCTTTCCTTTTCAGCATTACTAAAACCAGGCACACTGCAGAAGAAATTATGCAGGAAGTATTTTTACGGCTCTGGCAAAACAGGGAGAGTGTTGAAGCAGGCAATCTTGGAGGATGGTTGTACCGGGTGGCTTCCAATTTAGCTTATTCCTATCTGAAAAGAGAAGCATTAAATGGCCGTTTGCTTAGTTCTTTAAATAAAAAGCAAGCGAACCAGTTTTCCGAGATAGATCAGCAGATGGATTACAAGGAGTGCAGGGAACTGATCCATAAAGCGCTCAATCAATTGCCCGACCAACAACGCAAGGTATATCAGTTAAGCTTGCAGGAAGGCATGAGCAGGAAAGAAGTTGCTGAACTTCTAAATATTTCTCCCAATACTGTAAAAAATCATTTATCCAGGGCTTTGCAGTTTCTCAGACATTTTTTATCTCACGCTAACATTCTGATCATCTTCTTTTTTTAG
PROTEIN sequence
Length: 191
LNNNHSYDEYLLFQRITWGDEEAFREVVYYYSPKLISFLFSITKTRHTAEEIMQEVFLRLWQNRESVEAGNLGGWLYRVASNLAYSYLKREALNGRLLSSLNKKQANQFSEIDQQMDYKECRELIHKALNQLPDQQRKVYQLSLQEGMSRKEVAELLNISPNTVKNHLSRALQFLRHFLSHANILIIFFF*