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scnpilot_solids1_trim150_scaffold_342_curated_33

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(24785..25426)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA96_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 209.0
  • Bit_score: 192
  • Evalue 4.90e-46
two component transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 209.0
  • Bit_score: 192
  • Evalue 1.50e-46
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEV97043.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 209.0
  • Bit_score: 192
  • Evalue 6.80e-46

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 642
ATGTCTTATTTCCTGGTTGTTGACGATCATTCCATAGTAAGGTCAGGATTAATTTTATTGATCAAAGATTTCATGCCTCATGCAGAGATTGATGAGGCTTATGATGGCGATTCAGCTTTTGAAAAAATAAAGCAAAAAGATTACGACCTCGTTATTATGGATGTAAATATGCCCAACACAGATTCCTTTGGTATTTTCAATTCTATTTTTTCATTTAAGCCATCCATAAAAATTATTATTTTCAGTATGAATGCAGAAGAGCTTTATGCAAAAAGATACCTCAGGATGGGAGCAATGGGCTACCTGCGAAAAGATGCGCCGGGTTCCGAAATACAAAAAGCGATCACTTCTGTGCTGAATAATAAAAAATACATAAGTACAGAGCTGAGTGAAATATTATTATCAGACCTGCAGGATAAAAATCATTTGGAAAATCCGTTTGATAAATTATCGCCACGCGAATTTGAAATGGTGCAACACCTGAGCCGGGGTGAGTCAGTAGCCCGGATATCCCAAACACTAAATCTTCACAAATCCACAGTGGGCACACACAAGGCAAGGATCTTTGAAAAGCTGCAATGCGCTAATATTATTGAATTGAATAAACTGGCAGAGATCCATAATGTAATACTTACCACATAG
PROTEIN sequence
Length: 214
MSYFLVVDDHSIVRSGLILLIKDFMPHAEIDEAYDGDSAFEKIKQKDYDLVIMDVNMPNTDSFGIFNSIFSFKPSIKIIIFSMNAEELYAKRYLRMGAMGYLRKDAPGSEIQKAITSVLNNKKYISTELSEILLSDLQDKNHLENPFDKLSPREFEMVQHLSRGESVARISQTLNLHKSTVGTHKARIFEKLQCANIIELNKLAEIHNVILTT*