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scnpilot_solids1_trim150_scaffold_342_curated_39

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 31403..32425

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y208_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 336.0
  • Bit_score: 418
  • Evalue 8.70e-114
periplasmic binding protein/LacI transcriptional regulator; K02529 LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 336.0
  • Bit_score: 418
  • Evalue 2.70e-114
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ACU03001.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 336.0
  • Bit_score: 418
  • Evalue 1.20e-113

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1023
ATGAAACGAACTCACCAGGTCACTATTAAAGATATTGCGAGAGAACTAAAAATTTCTGTTACCACGGTTTCCAGGGCATTCAGAAATGCGCATGATGTGAGTATCAGCACAAGAAAAAAAGTATTGGCCAAAGGCGAAGAATTAAATTACCGTCCTAACTTCAATGCCAAAGGTTTAGTAGCTAACCAGTCGCATAATATTGCTATTATTTTACCAACCATTACCAACTATTATTTTTCTACAGTTATTACAGGCATACAGGAAGTGGCTTATAACAATGGGTATAACATAATACTTCATGTAACAGGCGAATCGCCGGAAAGAGAGATAATGATCGCAAAAGATTTATCCCTGAGTTCTATAGATGGCCTTCTCGTTTGTATAACTTCAGAATCCAATAAATCCAACCACTTCAGAAAGATCATTGATTCAGGCATACCTATTGTTTTTTTCGACAGGGTAGCCAATTTGAGCGGTATTTCAAAGGTGACACAAAATGATTTTGATGGGGCATTCATAGCGGTTGAGCATCTTATTAAAAACGGGTATAAAAGTATTGCGCATATCGGAGGCCCCTTCACGCTTTCATTTACCAAAGAAAGATTGAGAGGCTATCTTGCAGCTCTGAAAAAATACAATTTACCCATACAGCATAACCTGATCATACATTCTGAATTTACGCAACAAAGCGGATACCTTGATACAAAAAAATTATTGGGATCAGGAAATAAGCCAGATGCCATCTTTGCCGTAAACGACAGAAAAGCGATAGGCGCTACGCTTGCTTTGAAAGAAATGGGAATCAGGATTGGAAAAGAAGTAGGGGTAGTTGGCTTTACGAATGATCCTATCTCTGCACTCATCTCACCCTCTCTTACTACCGTAGAGGAGCCGGCATTAGAAGTAGGAAAGAAGAGCTGCGAGCTGCTTTTGATGCATATTTCCAGGAAAAATTTTATTGCAGAAGAGATCGTATTGGATGGTAAATTAATTATCCGTGAATCTTCATCACGATCCGACTGA
PROTEIN sequence
Length: 341
MKRTHQVTIKDIARELKISVTTVSRAFRNAHDVSISTRKKVLAKGEELNYRPNFNAKGLVANQSHNIAIILPTITNYYFSTVITGIQEVAYNNGYNIILHVTGESPEREIMIAKDLSLSSIDGLLVCITSESNKSNHFRKIIDSGIPIVFFDRVANLSGISKVTQNDFDGAFIAVEHLIKNGYKSIAHIGGPFTLSFTKERLRGYLAALKKYNLPIQHNLIIHSEFTQQSGYLDTKKLLGSGNKPDAIFAVNDRKAIGATLALKEMGIRIGKEVGVVGFTNDPISALISPSLTTVEEPALEVGKKSCELLLMHISRKNFIAEEIVLDGKLIIRESSSRSD*