ggKbase home page

scnpilot_solids1_trim150_scaffold_9094_curated_4

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(1720..2127)

Top 3 Functional Annotations

Value Algorithm Source
isopropylmalate isomerase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 134.0
  • Bit_score: 255
  • Evalue 9.40e-66
3-isopropylmalate dehydratase large subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2M7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 134.0
  • Bit_score: 257
  • Evalue 7.80e-66
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 136.0
  • Bit_score: 259
  • Evalue 2.20e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Sphingopyxis_65_24 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGCAGGACGTACCCATCGAGAATATCTTCATCGGCAGTTGCACCAACAGCCGCATCGAGGACATGCGCGCCGCCGCCGCGGTCATCAAGGGCCGCACGAAGGCCGACAATGTCAAATGGGCGATCGTCGTCCCCGGATCGGGGCTGGTGAAAGCGCAGGCCGAGGCCGAGGGGCTCGACCGCATCTTCCTCGACGCGGGGCTCGAATGGCGCGAGCCGGGCTGTTCGGCCTGCCTCGCGATGAACCCCGACAAGGTGCCCGCCGGCGAGCGCTGCGCATCGACCAGCAACCGCAATTTCGTCGGCCGTCAGGGCCCGGGCGCGCGCACGCATCTGGTCAGCCCGGCGATGGCTGCGGCGGCGGCGGTGACGGGCAAGCTCACCGATGTCAGGGAGCTGATGCGATGA
PROTEIN sequence
Length: 136
MQDVPIENIFIGSCTNSRIEDMRAAAAVIKGRTKADNVKWAIVVPGSGLVKAQAEAEGLDRIFLDAGLEWREPGCSACLAMNPDKVPAGERCASTSNRNFVGRQGPGARTHLVSPAMAAAAAVTGKLTDVRELMR*