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scnpilot_solids1_trim150_scaffold_26512_curated_1

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 3..1412

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 472.0
  • Bit_score: 823
  • Evalue 1.30e-235
ribonuclease; K08300 ribonuclease E [EC:3.1.26.12] similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 473.0
  • Bit_score: 816
  • Evalue 3.60e-234
Ribonuclease E n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAR9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 473.0
  • Bit_score: 818
  • Evalue 3.00e-234

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Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
CGCATCGAGGAGTTTGATTTCGAGTCCGCCGAGCACAAGCAGCTCAAGGGCAATATCTATCTGGCCAAGGTCACCCGCGTCGAACCGTCGCTGCAGGCGGCGTTCGTCGAATATGGCGGCAACCGTCACGGCTTCCTGGCCTTCAGCGAAATCCACCCCGATTATTACCAGATTCCGAAGGAAGACCGCGAAGCGCTGCTCCGCGAAGAGGCCGAGCATGCCGCCGAGGCGGCGATGCGCGCCGAAGAGGATCTCGACGAGCTGGAAGGCGACGTCGCCGAGGTCGAGGGACATGACGACGACGAGAATGGCGACGCCCCGGCGCCGGTGACGGTCGGCGAGGACAGCGACGACGACATGGACGCCGAGACCGGCGATGGCGACGGCGAATCCGATACGGACAATGGCGACGCCGAGGAATCGAAGGACGACCGCGGCGGGCGCCGCGGGCGCGGACGGGCGCGCGGTGGCCGCAAGGGTCGCGGCCGCGGCCGGAACGGCGACGACGACGGCGAAAGCCGCATGTCGCTGCGCCGCCGCTACAAGATCCAGGACGTCATCCGCCGCCGCCAGGTGATGCTGGTTCAGGTCGTCAAGGAGGAGCGCGGCAACAAGGGCGCCGCCCTCACCACCTATCTGTCGCTCGCCGGCCGCTATTGCGTGCTGATGCCGAACACGATGCACGGCGGCGGCATCAGCCGCAAGATCTCGAACGGTGCCGACCGTCGCAAGCTCAAGGCGATGATCGACGATCTCAATCTGCCGCCGACGATGGGCTGCATCGTCCGCACCGCCGGGATGAGCCGCACCAAGACCGAGATCAAGCGCGACTTCGACTATCTGGCCCGCCTGTGGGACGAGATTCGCGAAAAGACGCTGGCGTCGAGCGCCCCGGCACTGGTCCATTCGGACAGCGACCTGGTCAAGCGCGCGATCCGCGACATCTATCACAAGGATATCGAGGAAGTGCTCGTCGAGGGCGACGAGGGCTACAAGGCCGCGAAGCAGTTCATGAAGCTGCTGATGCCCAGCCACGCGCGGCGCGTGAAGCAATATGCCGACCCGGTGTCACTCTATCAGCGCTACGGCGTCGAGGATCAGCTCGCCGGGATGCTCAATCCCGTCGTCCAGCTCAAGTCGGGCGGCTATCTGGTCATCAACCCGACCGAGGCGCTGGTGTCGATCGACATCAACTCGGGCCGTTCGACGCGCGAGCATAATATCGAGCAGACCGCGCTCAACACCAACCTCGAGGCCGCGCACGAGATCGCGCGCCAGCTGCGCCTGCGCGACATGGCGGGGCTGATCGTCATCGACTTCATCGACATGGATCACGGCTCGAACGTCCGCAAGGTCGAGCGTGCGATGAAGGAAGCGCTGAAGAACGACCGCGCCCGCATCCAGATCGGC
PROTEIN sequence
Length: 470
RIEEFDFESAEHKQLKGNIYLAKVTRVEPSLQAAFVEYGGNRHGFLAFSEIHPDYYQIPKEDREALLREEAEHAAEAAMRAEEDLDELEGDVAEVEGHDDDENGDAPAPVTVGEDSDDDMDAETGDGDGESDTDNGDAEESKDDRGGRRGRGRARGGRKGRGRGRNGDDDGESRMSLRRRYKIQDVIRRRQVMLVQVVKEERGNKGAALTTYLSLAGRYCVLMPNTMHGGGISRKISNGADRRKLKAMIDDLNLPPTMGCIVRTAGMSRTKTEIKRDFDYLARLWDEIREKTLASSAPALVHSDSDLVKRAIRDIYHKDIEEVLVEGDEGYKAAKQFMKLLMPSHARRVKQYADPVSLYQRYGVEDQLAGMLNPVVQLKSGGYLVINPTEALVSIDINSGRSTREHNIEQTALNTNLEAAHEIARQLRLRDMAGLIVIDFIDMDHGSNVRKVERAMKEALKNDRARIQIG