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scnpilot_solids1_trim150_scaffold_11969_curated_2

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(801..1292)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreB n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPB0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 160.0
  • Bit_score: 295
  • Evalue 3.10e-77
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 160.0
  • Bit_score: 295
  • Evalue 4.40e-77
transcription elongation factor GreB; K04760 transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 160.0
  • Bit_score: 292
  • Evalue 8.30e-77

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GTGGCGGGGGACAGGAGCAACATCATCAGCCCGGCGGGCTTCGCCGCGCTGCGCGCCGAATATGACGCGCTGCTGGGCGAGGAACGGCCGAAGCTGGTCGAAACGATCAGCTGGGCGGCGGGCAACGGCGACCGCAGCGAGAACGGCGACTATATCTACGGCCGCAAGCGGCTGCGCGAAATCGACCGGCGGCTCGCCTTCCTCGCGCGGCGGATGAAGGCGGCGCGCGTCGTCGATCCGGCGGCGCAGCCCGACCAGGGCCGCATCTGGTTCGGCGCCACCGTCGAACTCGCCGACGAGGACGACATGCGGCGCACGGTCACGCTGACCGGCGACGACGAAGCCGACGCCGGCGCCGGGCGGATCGGCTGGAACAGCCCCCTCGCCCGCGCGCTGCGCGGCGCGGCGGTCGGCGACCTGCGCACGGTCCAGCTTCCCGCCGGCCCGAAGGAATGGGAAGTGATGACGATCGCCTATCCCGGCGCGGGATGA
PROTEIN sequence
Length: 164
VAGDRSNIISPAGFAALRAEYDALLGEERPKLVETISWAAGNGDRSENGDYIYGRKRLREIDRRLAFLARRMKAARVVDPAAQPDQGRIWFGATVELADEDDMRRTVTLTGDDEADAGAGRIGWNSPLARALRGAAVGDLRTVQLPAGPKEWEVMTIAYPGAG*