ggKbase home page

scnpilot_solids1_trim150_scaffold_4850_curated_4

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(1541..2164)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPC5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 207.0
  • Bit_score: 368
  • Evalue 4.80e-99
Transcriptional regulator, XRE family {ECO:0000313|EMBL:KGB58683.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 207.0
  • Bit_score: 371
  • Evalue 8.00e-100
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 207.0
  • Bit_score: 361
  • Evalue 1.90e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGGCGGACCGTTCGAACCCGCCGACGCTCGGCGCGGTGATGCGCGGAATTCGCTCGCGAAACGGCTGGACGCTCAAGGAAATGAGCGCGAAATCAGGTATCCCCGTGTCGACGCTGTCGAAGGTCGAGCACGACCGGCTGACCTTGAGCTATGACAAGCTTCAGCAGCTCAGCCAGCGACTCAACATCCGCATGTCGGATCTTTTCGCCGAGGGCGAGGAAGAGAGCGCGCCGCGCGTCACGGGCCGCCGCAGCATCGGCACGAAGGAAAAGGCGGTGCGCGTCACGACCGACAATTACGATTATCACTATCTTTGCACCGATCTGCGGCAAAAGCGGATGCTCCCCATCATCACCCGCATCCGCGCGCGCAGCGCCAGCGAGTTCGGCGAACTCGTCCGCCATCAGGGGGAGGAGTTCATCTTCGTCATCGAGGGGCGGATCGAGGTGCACAGCGAATTCTACGATCCGGTCACGCTCGAACAGGGTCAGGGCATCTATATCGATTCGACGATGGGGCATGCCTATGTCGTCGGTGAAGGTTGCGAGGAGGCGCTCGTCCTCGGCGTCTGCTCGAGCGCCGACGACGGGCTGATGGATTCGCTGATGAGCCTGCACGGCTAG
PROTEIN sequence
Length: 208
MADRSNPPTLGAVMRGIRSRNGWTLKEMSAKSGIPVSTLSKVEHDRLTLSYDKLQQLSQRLNIRMSDLFAEGEEESAPRVTGRRSIGTKEKAVRVTTDNYDYHYLCTDLRQKRMLPIITRIRARSASEFGELVRHQGEEFIFVIEGRIEVHSEFYDPVTLEQGQGIYIDSTMGHAYVVGEGCEEALVLGVCSSADDGLMDSLMSLHG*