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scnpilot_solids1_trim150_scaffold_16256_curated_2

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(676..1125)

Top 3 Functional Annotations

Value Algorithm Source
Protein-export membrane protein SecF n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSE6_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 150.0
  • Bit_score: 210
  • Evalue 9.30e-52
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 149.0
  • Bit_score: 232
  • Evalue 4.20e-58
SecF protein; K03074 preprotein translocase subunit SecF similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 150.0
  • Bit_score: 210
  • Evalue 2.90e-52

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Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
GTGTCGCTGACCTTCGGCTTCTTTGCGGTGACGCAGTTGCAGTTCGATCTCAACAGCGTCGCGGCGCTGCTGACGATCGTCGGCTATTCGCTCAACGACACGATCGTCGTCTATGACCGGATTCGCGAGAATCTGAAGAAATACCGCAAGATGGAGATCATTCCGCTGCTCAACCTCAGCATCAACGAGACCTTGTCGCGCACGGTGATGACCAGCGTCGCGATGTTCCTGGCGCTGGGCGTGCTGCTTATCTTCGGGCCGGACGTGATCTGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTCGGTGCTGATGTCGACGCCGGTGCTGGTCTGGCTGAAGGTCGGCCCGCACAGCTTCGTGCCGCGCACCTCGGCCGCGACCAGCGGCGCCGAGCGTGTCGCGCGCTCGGACGACGGCGCGGTGGTCTGA
PROTEIN sequence
Length: 150
VSLTFGFFAVTQLQFDLNSVAALLTIVGYSLNDTIVVYDRIRENLKKYRKMEIIPLLNLSINETLSRTVMTSVAMFLALGVLLIFGPDVICXXXXXXXXXXXXXXXXSVLMSTPVLVWLKVGPHSFVPRTSAATSGAERVARSDDGAVV*