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scnpilot_solids1_trim150_scaffold_8026_curated_5

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(2840..3139)

Top 3 Functional Annotations

Value Algorithm Source
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 99.0
  • Bit_score: 175
  • Evalue 9.10e-42
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=408 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (Methylobacterium dichloromethanicum); (Protomonas extorquens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 99.0
  • Bit_score: 175
  • Evalue 4.00e-41
succinate dehydrogenase n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034D82D9 similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 99.0
  • Bit_score: 175
  • Evalue 2.20e-41

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Taxonomy

Methylobacterium extorquens → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
GATCTCGGCGTCACCGACCGCTCGCTGGTGTGGAACACCGATCTCGTCGAGACGATGGAATTCGACAACCTGATCCAGCAGGCGGTGGTGACGATGGATTCCGCGAAGAACCGCAAGGAATCGCGCGGCGCCCATGCCCGCGAGGACTTCAAGGACCGCGACGACAAGAACTGGATGAAGCACACGCTCGCCTTCCTCGACCAGTCCAGCCAGACCGTCTCGATCGATTACCGTCCGGTGCACAGCTACACCATGTCGAACGACATCGAGTATATCGAGCCCAAGGCACGGGTTTATTGA
PROTEIN sequence
Length: 100
DLGVTDRSLVWNTDLVETMEFDNLIQQAVVTMDSAKNRKESRGAHAREDFKDRDDKNWMKHTLAFLDQSSQTVSIDYRPVHSYTMSNDIEYIEPKARVY*