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scnpilot_solids1_trim150_scaffold_24353_curated_2

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(193..654)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GV77_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 153.0
  • Bit_score: 295
  • Evalue 2.30e-77
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein similarity KEGG
DB: KEGG
  • Identity: 96.1
  • Coverage: 153.0
  • Bit_score: 295
  • Evalue 7.10e-78
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 153.0
  • Bit_score: 295
  • Evalue 3.20e-77

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Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGCCGACCAAGATTGCCGATGTTGGCGCCGACGCCCTCCGCGAAGCCAGGTCCAATCTCGATTCGGATTATGTCCCCAACGAGGACGAGCCGTTCATGAACGAACGGCAGCAGGATTATTTCCGCGGCCTCCTGCTCGCCTGGAAGAAGTCGATCCTTTCCGAAGCCGAATCGACGCTGGCGCATCTGCAGGACGGTCCGCTGCGCGAGCCCGACCTCGCCGACCGCGCGTCGAGCGAGACCGACTGGGCGATCGAGCTGCGGACCCGCGACCGCCAGCGCAAGCTGATCGCCAAGATCGACGCCGCGATCCGCCGCATCGACGAAGGCGAATATGGCTATTGCGCGGTCACCGGCGAACCCATCTCGCTCGCGCGGCTTCAGGCGCGCCCGATCGCGACGATGACGCTGGAAGCGCAGGAGCGCCACGAGCGCAACGAGCGCATTTCGCGCGAGGATTGA
PROTEIN sequence
Length: 154
MPTKIADVGADALREARSNLDSDYVPNEDEPFMNERQQDYFRGLLLAWKKSILSEAESTLAHLQDGPLREPDLADRASSETDWAIELRTRDRQRKLIAKIDAAIRRIDEGEYGYCAVTGEPISLARLQARPIATMTLEAQERHERNERISRED*