ggKbase home page

scnpilot_solids1_trim150_scaffold_6420_curated_1

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 104..676

Top 3 Functional Annotations

Value Algorithm Source
SSU ribosomal protein S30P / sigma 54 modulation protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GP80_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 191.0
  • Bit_score: 331
  • Evalue 4.60e-88
sigma 54 modulation protein/ribosomal protein S30EA similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 191.0
  • Bit_score: 331
  • Evalue 1.40e-88
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 191.0
  • Bit_score: 335
  • Evalue 5.80e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Sphingopyxis_65_24 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGGAAATCCGCGTCTCTGGCCACCAGATCGAAACCGGTGAAGCGCTGCAAGCGCGTGTTTCGGACCGGATGAACGCGATTGCCGACAAATATTTCTCTCGAGCGATCGGCGCGCATGCGATTTTCGGCAAGGGGCCGCACGACAGCTTCCAGTGCGACATCGTCGCGCATGTGATGCAGGGGCTGGTCCTGAAAGGTCATGGACAGGCGCAGGATGCGCATGTCGCGTTCGAGAATGCGGCCGAGCGCATCGAGAAGCAGCTGAGGCGCTATATGCGACGGCTCAAGGATCGCGGCACGCCGACGCAGCCGTCGCCGACCCTCGACGAGATCCGGGGCAATGCCGGCTACACCGTGTTCGAGGCCGGCAGCGAGGAGGAGGAAGCGGGCGACGCCCCGGCGATCATCGCCGAAACGCGCGTCGACGTGCCGACCAGCAGCGTGTCGGACGCGGTGATGATGCTCGACCTTCGCAACACCAATGCGCTGCTGTTCCTCAACAGCCGGACCGACACCTACAACATGGTCTATCGCCGCTCCGACGGCACGATCGGATGGGTCGAACCGCAATAG
PROTEIN sequence
Length: 191
MEIRVSGHQIETGEALQARVSDRMNAIADKYFSRAIGAHAIFGKGPHDSFQCDIVAHVMQGLVLKGHGQAQDAHVAFENAAERIEKQLRRYMRRLKDRGTPTQPSPTLDEIRGNAGYTVFEAGSEEEEAGDAPAIIAETRVDVPTSSVSDAVMMLDLRNTNALLFLNSRTDTYNMVYRRSDGTIGWVEPQ*