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scnpilot_solids1_trim150_scaffold_12063_curated_2

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 1383..1934

Top 3 Functional Annotations

Value Algorithm Source
Single-stranded DNA-binding protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GNS9_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 183.0
  • Bit_score: 303
  • Evalue 1.30e-79
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 187.0
  • Bit_score: 310
  • Evalue 1.50e-81
single-strand binding protein; K03111 single-strand DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 183.0
  • Bit_score: 303
  • Evalue 4.10e-80

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Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGGCAGGCAGCGTCAACAAGGTTATCCTGATCGGCAATCTGGGCGCCGATCCCGAAATCAAGTCGTTCCAGAACGGCGGCCGGATCGCCAATATCCGCATCGCCACCTCCGAAAGCTGGAAGGACCGGATGACCGGCGAGCGCAAGGAGCGCACCGAATGGCACAATGTCGTCATCAACGGCGACGGGCTGGTCGGCGTCGTCGAGCGCTATCTGAAGAAGGGCAGCAAGGTCTATGTCGAGGGGTCGCTGCGCACCCGCAAGTGGCAGGACCGCGACGGCAACGACCGCTATACGACCGAGGTGGTGATCGCCGGCATGGGCGGCGCGCTGACGATGCTCGACGGCGCCCCCGGCGGCGGCGGATCGCGCGGCGGCGGCGATAGCTGGGGCGGCGGCGGTTCGGGTTCGGGCGACAGCTGGGGACAGGGCGGCGGCGGCGGTTCTTCCGGCGGCGGCGGCTGGAACCAGGGCGGCGGCGCCTCGGGCGGCGGCGGCGGTGGCGGACGCCCGCCCTTCGACGACGACCTCGACGACGATGTTCCGTTCTGA
PROTEIN sequence
Length: 184
MAGSVNKVILIGNLGADPEIKSFQNGGRIANIRIATSESWKDRMTGERKERTEWHNVVINGDGLVGVVERYLKKGSKVYVEGSLRTRKWQDRDGNDRYTTEVVIAGMGGALTMLDGAPGGGGSRGGGDSWGGGGSGSGDSWGQGGGGGSSGGGGWNQGGGASGGGGGGGRPPFDDDLDDDVPF*