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scnpilot_solids1_trim150_scaffold_4939_curated_4

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 1336..2292

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 319.0
  • Bit_score: 545
  • Evalue 4.70e-152
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 319.0
  • Bit_score: 544
  • Evalue 1.80e-152
tRNA pseudouridine synthase B n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVR0_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 319.0
  • Bit_score: 544
  • Evalue 5.80e-152

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Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 957
ATGAACGGCTGGATCATCCTCGACAAGCCCATCGGCCTCGGCTCGACCCAGGCGGTCGCTGCGGTCAAGCGGGTGTGCCGCGAACGCGGGCTCGGCAAGGTCAAGGTGGGGCATGGCGGGACGCTCGACCCGCTGGCGTCCGGGGTGTTGCCGATCGCGCTCGGCGAGGCGACCAAGCTGTGCGGTCGGATGCTCGACGCGAGCAAGGTCTATGATTTCATCATCGCGTTCGGAACCGAGACCGCGGGCCTCGATGCCGAGGGTGAGGTCGTCGCGACGAGCGACGTCCGGCCGACGCTGGCGGACATCGAAGCGGTGCTGCCACGCTTCACCGGGCCGATCGAGCAGGTGCCGCCGGCCTTTTCGGCGATCAAGGTGGACGGGCAGCGCGCCTATGACCTGGCCCGCAAGGGCGCGGCGGTCGACATGAAGGCGCGCGCGGTGATCATCTACAACCTGCGTCATGCCGGACTTGATCCGGCATCCATTCGTTCGGCGCGGGAAGAATGGACCCCGGATCAAGGCCGGGGTGATGAGATGGCGGAGGGGTTGAACTCCATCACCCTTACCGCGCATGTCTCGAAAGGCACCTATATCCGCAGCCTCGCGCGCGACATCGCCCGCGCGGCCGGCACCGTCGGGCATGTCGCCATGCTGCGCCGCACCCGGGCGGGGCCGTTCACGCTGGATCAGGCGATTTCGCTGGACAAATTGAACGCTTTCGGTCAAGGCGCCGCGCAATCAGATGTGATTCTGCCGCTCGAGGCAGGGCTGGTCGACATCCCGGCTTTGGACCTCTCCCCGGAAGCGGCAGGGGCGATCCGCCAGGGTCGTGTCTGGACCGGGGAAAGCGCGCACGACGGGCTCTATTGGGGACGGGACAGCGAGAAGCGGCCCGTTGCGTTGATAGAGGCTTTGGCCGGAAGGCTGAAGGTCGTGCGGGGCTTCAATCTGTAA
PROTEIN sequence
Length: 319
MNGWIILDKPIGLGSTQAVAAVKRVCRERGLGKVKVGHGGTLDPLASGVLPIALGEATKLCGRMLDASKVYDFIIAFGTETAGLDAEGEVVATSDVRPTLADIEAVLPRFTGPIEQVPPAFSAIKVDGQRAYDLARKGAAVDMKARAVIIYNLRHAGLDPASIRSAREEWTPDQGRGDEMAEGLNSITLTAHVSKGTYIRSLARDIARAAGTVGHVAMLRRTRAGPFTLDQAISLDKLNAFGQGAAQSDVILPLEAGLVDIPALDLSPEAAGAIRQGRVWTGESAHDGLYWGRDSEKRPVALIEALAGRLKVVRGFNL*