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scnpilot_solids1_trim150_scaffold_287_curated_3

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 1430..2365

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A438CB similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 308.0
  • Bit_score: 359
  • Evalue 2.60e-96
LysR substrate binding domain protein {ECO:0000313|EMBL:ETN72013.1}; Flags: Fragment;; TaxID=51031 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Bunostominae; Necator.;" source="Necator americanus (Human hookworm).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 268.0
  • Bit_score: 411
  • Evalue 1.00e-111
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 304.0
  • Bit_score: 355
  • Evalue 1.50e-95

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Taxonomy

Necator americanus → Necator → Rhabditida → Chromadorea → Nematoda → Metazoa

Sequences

DNA sequence
Length: 936
ATGTTCACCCTGCGCCAGCTGGAATTCGTGGTCGCCGTCGCCGAGGAAGGCGGGTTCACCGCGGCGGCGGCGCGCTGCCACACCGTGCAGTCGGCGCTGAGCCACCAGGTGGCGCGGCTGGAGGAGGCCTTCGGTGCGCGCCTGTTCGAGCGCGGCCACCGCCAGGTGCGGCCCACCGCCGCCGGCGAGGTATTCCTGCGCAACGCCCGGCTCACCCTGCAGGCCGCCGACCGCCTGCAGGAGGAGATGGCGCTGGCGCTGGGCACGGTGCGCGGGCGCATCCGCATCGGCCAGATCACCGCGCTCACCGTGGTCGACGTCCCCGACCTGCTGGCCCGGTTCCGGGGCGCGTATCCGGCCGTGGACGTGCACCTGCGCGTGGGCATGAGCGAGGAGCTGCTGGCCGAGCTGGCCGAGGGCAGGCTGGACGTGGCCCTGGTCGGCGTCGGCCCGCAGGTGCCGCTGCCGGCGCAGCACCGCCTGCTCGACGAGGAAGGCCTGTCGCTGCTGCTGCCGCGCGGGCATGCATTGGCGGCGATGCAGCGGGTGCCGCTGCCCGCGCTCGACGGCGTCCCGCTGGCGGCGCTGGTTCCCGGCGCCGGCGTGCGCCGGATGATGGACGACGCCCTGCGCGAGCGCGGCGTCGCGCCGCGGCTGCAGTACGAGGTCAGCCATGGCGAACTGCTGCGGCAACTGGTGGCCGCCGGGCTCGCGGTCGCGGCGATCCCGGACAGCATGGCCGCGCGCATGCAGGGGGTGGACGTGCGCCCGCTGGCCGAGCCGTTCCGCTTCCGCACCTGCGCGGTCTGGCGCGCCGATCCCACGCCCGCCGCGCGCGCCCTGCTCGACCTGTTGCCCGCCGCCGCGACGCACGGGCCGCGCATCGAACCTGCTAAGGTGCGCCGCAAACCAAGGAACCCACGTGGCCGGCCATAA
PROTEIN sequence
Length: 312
MFTLRQLEFVVAVAEEGGFTAAAARCHTVQSALSHQVARLEEAFGARLFERGHRQVRPTAAGEVFLRNARLTLQAADRLQEEMALALGTVRGRIRIGQITALTVVDVPDLLARFRGAYPAVDVHLRVGMSEELLAELAEGRLDVALVGVGPQVPLPAQHRLLDEEGLSLLLPRGHALAAMQRVPLPALDGVPLAALVPGAGVRRMMDDALRERGVAPRLQYEVSHGELLRQLVAAGLAVAAIPDSMAARMQGVDVRPLAEPFRFRTCAVWRADPTPAARALLDLLPAAATHGPRIEPAKVRRKPRNPRGRP*