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scnpilot_solids1_trim150_scaffold_287_curated_34

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(29056..29736)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver:Transcriptional regulatory protein, C-terminal n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TXD9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 224.0
  • Bit_score: 309
  • Evalue 2.20e-81
XRE family transcriptional regulator {ECO:0000313|EMBL:EYR69243.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 224.0
  • Bit_score: 332
  • Evalue 5.90e-88
Two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 224.0
  • Bit_score: 302
  • Evalue 1.50e-79

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGCGCATACTGGTCGTCGAGGACGATACCCAGATTTCGGCCTTCATCGCCAAGGGGCTGCGCGAGGACGGACACGTCGTGGACTGCGTGGACAACGGCCGCGACGGCCTGTTCATGGCCACCACCGAGGCCTATGCCGCGGTCGTGCTCGATCGCATGCTTCCCGGCCTGGACGGCCTCACCGTGCTGCGCACGCTGCGTGGCGCCGGCAATGCGGTGCCGGTGCTGCTGCTGACCGCGCTGGCCGATGTCGACCACCGGGTGGAAGGCCTGCGCGCCGGTGCCGACGACTATCTGGTCAAGCCGTTCGCGTTCGCCGAACTCAGCGCCCGGCTCGACGGCCTGTCGCGGCGCAGCCCGGCCGCGTCGCCGGCCGCGCCATCGACGCGGCTGCAGGTGGCCGACCTGGAGCTGGACCTGCTGCGCCGCACCGCCTCGCGCGCCGGGCGCGCCATCGAGCTGCTGCCGCGCGAGTTCATGCTGCTCGAATACCTGATGCGCAACGCCGGCCGGGTGGTCACCCGCACGATGCTGCTGGAATCGGTGTGGAACTACCACTTCGATCCGCAGACCAACGTGATCGACGTGCACATCAGCCGCCTGCGGCAGAAGATCGACCATGGTTTCGCCAGCACGCTGCTGCATACCGTGCGCGGCGCCGGTTACCGGCTCGACGGGTGA
PROTEIN sequence
Length: 227
MRILVVEDDTQISAFIAKGLREDGHVVDCVDNGRDGLFMATTEAYAAVVLDRMLPGLDGLTVLRTLRGAGNAVPVLLLTALADVDHRVEGLRAGADDYLVKPFAFAELSARLDGLSRRSPAASPAAPSTRLQVADLELDLLRRTASRAGRAIELLPREFMLLEYLMRNAGRVVTRTMLLESVWNYHFDPQTNVIDVHISRLRQKIDHGFASTLLHTVRGAGYRLDG*