ggKbase home page

scnpilot_solids1_trim150_scaffold_701_curated_16

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(18093..19994)

Top 3 Functional Annotations

Value Algorithm Source
multidrug MFS transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E8746E similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 636.0
  • Bit_score: 920
  • Evalue 1.30e-264
Putative polysaccharide biosynthesis protein epsC {ECO:0000313|EMBL:EZP43054.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 633.0
  • Bit_score: 916
  • Evalue 2.00e-263
polysaccharide biosynthesis protein CapD similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 633.0
  • Bit_score: 914
  • Evalue 1.30e-263

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1902
ATGGCGGTCTGGCGACAGCTGGCAGGAAATTTTCCGCGCATCGCGGTGATGCTGCATGACCTGGTCATGGTATGGGCGTGCTGGCAACTGCTGCACATTGCCCGCTATGCGATGCTGGAGGGCGCCCCGGCCATTCAGCCGCTCAGCTTCGATATTGCCATCGTGATGCTGCTGCAGGCCATGGCGTTCCATTACGTGGGCCTGTACCGCGGGCTTTGGCGCTTCGCCAGCGTCACCGACCTGGTCAACATCTTCAAGGCCTGCTTCATCGGCGTGGGCGCGATCGTCCTGGTGTTCAGCTACCGGCGCCTGAATGGCATTCCCATGTCCGTGCTCGCGATCTATCCGTTCGCGCTGGCGGCCCTGCTCGGCGGGCCACGTCTTCTGTACCGTGCATGGAAGGACCACCAGTCGATCCATTCCGATGCCCGGGCGCGACGGGTGCTGGTGCTGGGGGCCGGGCATGCCGCCGAAGCGCTGGTCAAGGACCTGCGCCGATCGGGCGACTACGAACCCGTGGGCCTGCTTGACGACTCGCCGCACCTGAAAGGGGCCAAGCTGCAGGGCATCCCGATCCTGGGGACCATCGCCGACGTGGCGTCCGTTGCCAAGGAAACGGCGGCGAAACTGCTGGTGATCGCCATTCCCACCCTGGATGCGGCGGGCATGCAGCGGATCGTGGCGCTGTGCGAGAGCACCGGCCTGCCGTTCCGGACCGTGCCAAGGCTGAGCGATGTCCTGGAAGGAAACTCGCTGCCCGGGCAGCTCAAGGAAGTGGCGATCGAGGACCTGCTGGGTCGCAAGCCCATACAGCCGGACTGGGCGCTGATCCGGGGTTGGCTGCGCGGGCGCACGGTGATGGTGACCGGTGCCGGTGGATCCATCGGCTCCGAGCTCTGCCGCCAGTGCGCGCGCCATGGCGCGGGCAGGATCGTGCTCCTGGAAATCAGCGAGATTCTCATGCTGAACATCCAGAGCGAACTCTGCCGCAACTTCCCGCACCTGGAAATCGAGTGCGTACTGGGCGACTGCGGCGATCCGGCGGTCGCCCGCCGTGCGCTGGGCCTGTACCGGCCGGATACCGTATTCCACGCCGCGGCCTACAAGCAGGTCCCGCTGCTCGAGGGGCAGATGCGGGAAGCCATCCGCAACAATACGTTGGCGACGGAGTGCATGGCCCGGGCCTGCCAGGAACACGGCGTGGACAATTTCGTGTTCATTTCCACCGACAAGGCGGTCGACCCGGCCAATGCGCTGGGTGCGACCAAGCGTTATGCGGAAATGATCTGCCAGAGCCTCAACGAGAAGAAGGGAACCCGCTTCGTCACCGTGCGCTTCGGCAATGTGCTGGGTTCGGTGGGCAGCGTGGTTCCCCTGTTCCGCGAACAGATCCGCAAGGGCGGGCCGGTGACCGTGACCCATCCCGAGGTCAGCCGCTATTTCATGACGATCCCCGAAGCCTGCCTGCTGATCCTGCAGGCGGCGGCCTCCTCGTCGCGTGGTGCGATCTACATGCTGGACATGGGCGAGCCGGTGCTGATCCGGGTGCTGGCCGAGCAGATGATCCGGCTGGCCGGGCACCAGCCGGGTACCGATATCGCCATCGTCTATACCGGGCTGCGTGCGGGCGAGAAACTGCATGAAAGCCTGTTCTATTCGGATGAGAACAGCCGGCCGACCGCCCACCCCAAGGTGCTCGAGGCCGGCGTCCGCGAATTTTCCGTCGAGCGCGTGCTGGGCAGCCTGCCGCGCCTGCGCGAGGCGGTAGCCAGTTATGATGCCGAGGCCATGCAGGCCATTCTGTCCGCCGTCATTCCCGAGTATTCGCCAATGCGCGAAACGAAGGGCGCGAGCACGAAAACCAATATTGTCCCGTTTCCCAAAGAGGCTGGTAGGAACTGA
PROTEIN sequence
Length: 634
MAVWRQLAGNFPRIAVMLHDLVMVWACWQLLHIARYAMLEGAPAIQPLSFDIAIVMLLQAMAFHYVGLYRGLWRFASVTDLVNIFKACFIGVGAIVLVFSYRRLNGIPMSVLAIYPFALAALLGGPRLLYRAWKDHQSIHSDARARRVLVLGAGHAAEALVKDLRRSGDYEPVGLLDDSPHLKGAKLQGIPILGTIADVASVAKETAAKLLVIAIPTLDAAGMQRIVALCESTGLPFRTVPRLSDVLEGNSLPGQLKEVAIEDLLGRKPIQPDWALIRGWLRGRTVMVTGAGGSIGSELCRQCARHGAGRIVLLEISEILMLNIQSELCRNFPHLEIECVLGDCGDPAVARRALGLYRPDTVFHAAAYKQVPLLEGQMREAIRNNTLATECMARACQEHGVDNFVFISTDKAVDPANALGATKRYAEMICQSLNEKKGTRFVTVRFGNVLGSVGSVVPLFREQIRKGGPVTVTHPEVSRYFMTIPEACLLILQAAASSSRGAIYMLDMGEPVLIRVLAEQMIRLAGHQPGTDIAIVYTGLRAGEKLHESLFYSDENSRPTAHPKVLEAGVREFSVERVLGSLPRLREAVASYDAEAMQAILSAVIPEYSPMRETKGASTKTNIVPFPKEAGRN*