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scnpilot_solids1_trim150_scaffold_314_curated_60

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 65633..66742

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilM n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SW61_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 369.0
  • Bit_score: 649
  • Evalue 1.90e-183
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:CCP40325.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 369.0
  • Bit_score: 649
  • Evalue 2.70e-183
pilM; putative type 4 fimbrial biogenesis protein PilM; K02662 type IV pilus assembly protein PilM similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 360.0
  • Bit_score: 631
  • Evalue 2.20e-178

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Taxonomy

Xanthomonas translucens → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATGCGCGGGCGCAACAAGTGCGTCCAAGTGCCCGTCGGCAGGGGAGAAACCGTGGGGCTTATCCCAAAGAGTCAGCCACCGATCATCGGTGTTGACATCAGCTCGACTGCGGTGAAGCTGCTTCAGCTCGCCCGCAGCGGCAATCGCTTTCGCGTGGAACATTACGCCGTGGAACCACTTCCGCCGAATGCGGTGGTGGAAAAGAACATCGTCGAGGTCGAGGCGGTCGGCGAGGCCATACGTCGTGCCGTGGCGCGCTCGGGAACCCGCGCCAAGGGCGCGGCCGCCGCGGTCGCCGGTTCGGCGGTGATCACCAAGGTGATCCCGATGCCGGCCGACCTGGACGAGGCCGACATGGAAGCCCAGGTCGAGCTGGAGGCGGTGAACTACATCCCGTATCCGATCGAGGAAGTGAGCCTGGATTTCGAGGTGCTCGGGCCGGTGCCCAACAACCCGGAAATGGTCCAGGTGCTGCTGGCGGCCTCGCGCTCGGAGAATGTCGAACTGCGCCAGTCGGCGCTGGAGCTGGGCGGCCTGGTGGCCAAGGTCATGGACGTGGAAGCGTTCGCGATCGAGAACGCCTTCGCGCTGGTGGCCAGCGAACTGCCGGTGGCCAGTGACGGCGTGGTCGCGCTGGTGGACATCGGCGCCACCATGACCACGCTCAACGTCCTGCGTGGCGGGCGCAGCCTGTACAGCCGCGAACAGGTGTTCGGCGGCAAGCAGCTCACCGACGAGGTGATGCGCCGCTACGGGCTGAGCTACGAGGAAGCCGGCCTGGCCAAGCGCCAGGGCGGGTTGCCGGAGAGCTACGAGGTGGAAGTGCTGGAGCCGTTCAAGGAAGCCACGGTGCAGCAGATCGGCCGCCTGCTGCAGTTCTTCTATGCCGGCAGCGAGTTCAATCGCGTCGATCACATCGTGCTGGCCGGCGGCTGCGCGTCGCTGCCGGGGCTGCCGGTGATGGTCGAGGAGCAGCTGGGGGTGAGCACGTCGGTGGCCAATCCGCTGGCGCAGATGACGCTGGGGCAGAAGGTGCAGGCGCATGCGCTGGCCCAGGATGCCCCGGCGCTGATGATCGCCACCGGCCTGGCCCTGCGGGGGTTCGACTGA
PROTEIN sequence
Length: 370
MRGRNKCVQVPVGRGETVGLIPKSQPPIIGVDISSTAVKLLQLARSGNRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAVARSGTRAKGAAAAVAGSAVITKVIPMPADLDEADMEAQVELEAVNYIPYPIEEVSLDFEVLGPVPNNPEMVQVLLAASRSENVELRQSALELGGLVAKVMDVEAFAIENAFALVASELPVASDGVVALVDIGATMTTLNVLRGGRSLYSREQVFGGKQLTDEVMRRYGLSYEEAGLAKRQGGLPESYEVEVLEPFKEATVQQIGRLLQFFYAGSEFNRVDHIVLAGGCASLPGLPVMVEEQLGVSTSVANPLAQMTLGQKVQAHALAQDAPALMIATGLALRGFD*