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scnpilot_solids1_trim150_scaffold_126_curated_23

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(24817..25494)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Xanthomonas sacchari RepID=UPI000262AA26 similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 225.0
  • Bit_score: 435
  • Evalue 2.70e-119
XRE family transcriptional regulator {ECO:0000313|EMBL:AJC47748.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 225.0
  • Bit_score: 435
  • Evalue 3.70e-119
two-component system response regulator protein similarity KEGG
DB: KEGG
  • Identity: 96.9
  • Coverage: 225.0
  • Bit_score: 434
  • Evalue 2.40e-119

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Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
GTGCGCATTCTCGTAATCGAAGACAACAGCGACATCGCGGCCAACCTGGGGGACTACCTTGAAGACCGCGGGCATACCGTGGATTTCGCGGCCGACGGCGTGACCGGCCTGCACCTGGCGGTCGTGCACGATTTCGATGCGATCGTGCTCGACCTGAACCTGCCGGGCATGGACGGCATCGAGGTCTGCCGCAAGCTGCGCAACGACGCGCGCAAGCAGACCCCGGTGCTGATGCTCACCGCGCGCGATTCGCTGGACAACAAGCTGGCCGGGTTCGACTCCGGTGCCGACGACTACCTGATCAAGCCGTTCGCGCTGCAGGAAGTCGAGGTGCGGCTCAACGCGCTGTCGCGTCGCGGCAAGGGCGGGCACACCCGCGTGCTGGAAACCGGTGACCTGGAGTACAACCTGGACACGCTGGAGGTTCGCCGCCAGGGCAAGCTGCTGCAGCTCAATCCGACCGCGCTGAAGATCCTGCAGGCGCTGATGGAAGCCTCGCCGGCGGTGGTCACCCGCCAGGAGCTGGAAACCCGTGTGTGGGGCGAGGAACTGCCCGATTCGGACTCCCTGCGCGTGCACATCCACGGCCTGCGCGCGGTGGTGGACAAGCCGTTCAACGCGCCCATGATCCAGACCCGCCATGGCATTGGATACCGGATCGCCGCACCCGATGCCTGA
PROTEIN sequence
Length: 226
VRILVIEDNSDIAANLGDYLEDRGHTVDFAADGVTGLHLAVVHDFDAIVLDLNLPGMDGIEVCRKLRNDARKQTPVLMLTARDSLDNKLAGFDSGADDYLIKPFALQEVEVRLNALSRRGKGGHTRVLETGDLEYNLDTLEVRRQGKLLQLNPTALKILQALMEASPAVVTRQELETRVWGEELPDSDSLRVHIHGLRAVVDKPFNAPMIQTRHGIGYRIAAPDA*