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scnpilot_solids1_trim150_scaffold_326_curated_25

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(30312..31916)

Top 3 Functional Annotations

Value Algorithm Source
betA; choline dehydrogenase; K00108 choline dehydrogenase [EC:1.1.99.1] similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 522.0
  • Bit_score: 809
  • Evalue 5.10e-232
choline dehydrogenase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0003745DF6 similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 522.0
  • Bit_score: 828
  • Evalue 4.40e-237
GMC family oxidoreductase {ECO:0000313|EMBL:AJC44533.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 522.0
  • Bit_score: 832
  • Evalue 3.30e-238

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Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1605
ATGCGGGAATTCGACTACATCATCATCGGTGCCGGTTCGGCCGGCTGCGTGCTGGCCAACCGGCTCAGTGCCGATCCACAGGTGCAGGTGCTGCTGGTCGAGGCCGGCCCGCGCGACCGCAACCCGTTCATCCACATGCCGGCCGGGCTGGCACGGCTGGTCGACAACCGCCGCCTCAACTGGAGCTACCACACCGAACCGGAACCGCAGTTGCAGGGACGGCGGCTGTGGTGGCCGCGCGGCAAGGTCCTGGGCGGCTCGAGTTCGATCAATGCGATGTGCTACGTGCGCGGCGTCGCCGGCGACTACGACCGCTGGGCCGCGGCCGGTGCCACCGGCTGGGACTGGGCCGGCGTGCTGCCGTGGTTCCGCCGGAGCGAACGCAACAGCCGCGGCGGCGACGCGCTGCACGGCAGCGACGGCCCGCTGCATGTTTCCGACCTGCGTCACGTCAACCCGCTCAGCCATGCCTTCATCGAAGCCGGCGTGCAGGCCGGCCATCCGCACAATCATGATTTCAACGGACCGGCGCAGATCGGCGTCGGCCTGTACCAGGTGACGCAGAAGGAAGGTGCGCGCTGTTCGTCGGCCGCCGCCTATCTGGCGCCGGCACGACCGCGCCGCAACCTGCAGGTACTGACCGGGGCCCTGGTCGAGCGCATCCTGGTCGACGCCGGACGCGCGCACGGCATCGCCCTGCGCCACGGCGGGCGACGGCTGCACCTGCACGCGCGATGCGAGGTCCTGCTCAGCGCCGGCGCGGTCAATTCGCCACAGCTGCTGATGCTCTCCGGGATCGGCCCGGCCGATGCCCTGCGCGCCCACGGCATCGCGGTGCAGCTCGACCAGCCACAGGTCGGCGCCAACCTGCAGGACCACCTGGACATCTGCACCCTGTACCGCACCGTTCCCGGGGTCAGCTACGACCGCGCCAGCGAGCTGAAGATCGCGTTCGACTGGTTCCTGCGCGGCCATCGCGGCGCCGGCAGCAGCAACATCGCCGAGGCCGGCGGTTTCGTGCGCTCGCGCCTCGCCGCCGACGAGCGCGCCGACATCCAGTTCCATTTCGTACCGGCGATGCTCGACGACCACGGCCGCCACCGGCTGCCTGGCGACGGCTACACCCTGCACGCCTGCTACCTGCACCCGCGCAGCCGCGGGCACATCGCCCTGGCCGGCGCGGAACCGTCGCTACCGCCCAGGATCCACGCCAACTACCTGGGCGACAGCGACGGCTTCGACCTGCGGATGATGATCGAAGCCGCACGCCTGAGCCGCGACCTCCTGCGCCAGCCCGCCTTCGATCGCTGGCGGCGCGCACCGGTCTTCCCCGCGCGCGAGGACCTGGACGATGCCGGGCTGGAAGCGTTCATCCGCGCCAAGGCCGAAACCATCTACCACCCGGTCGGCACCTGCCGCATGGGCAGCGACGACGCGGCGGTGCTCGACCCGCAGTTGCGGCTGCGCGGCGTGGAGGGACTGCGCGTGATCGATGCCTCGGCGATGCCCACGCTGGTCAGCGGCAACACCAACGCACCGGTGATCATGATGGCCGAGCGCGCGGCGGCGTTGATCCTCGACCCGCAGGCCGGATCGCCGCCCTGA
PROTEIN sequence
Length: 535
MREFDYIIIGAGSAGCVLANRLSADPQVQVLLVEAGPRDRNPFIHMPAGLARLVDNRRLNWSYHTEPEPQLQGRRLWWPRGKVLGGSSSINAMCYVRGVAGDYDRWAAAGATGWDWAGVLPWFRRSERNSRGGDALHGSDGPLHVSDLRHVNPLSHAFIEAGVQAGHPHNHDFNGPAQIGVGLYQVTQKEGARCSSAAAYLAPARPRRNLQVLTGALVERILVDAGRAHGIALRHGGRRLHLHARCEVLLSAGAVNSPQLLMLSGIGPADALRAHGIAVQLDQPQVGANLQDHLDICTLYRTVPGVSYDRASELKIAFDWFLRGHRGAGSSNIAEAGGFVRSRLAADERADIQFHFVPAMLDDHGRHRLPGDGYTLHACYLHPRSRGHIALAGAEPSLPPRIHANYLGDSDGFDLRMMIEAARLSRDLLRQPAFDRWRRAPVFPAREDLDDAGLEAFIRAKAETIYHPVGTCRMGSDDAAVLDPQLRLRGVEGLRVIDASAMPTLVSGNTNAPVIMMAERAAALILDPQAGSPP*