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scnpilot_solids1_trim150_scaffold_1650_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1650_curated_1
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18..998)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VE02_STEMA
Short-chain dehydrogenase {ECO:0000313|EMBL:KGM53688.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
short-chain dehydrogenase/reductase SDR
scnpilot_solids1_trim150_scaffold_1650_curated_2
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1072..1464)
DNA (393bp) protein (131aa)
membrane protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B3E7E1
Putative small integral membrane protein {ECO:0000313|EMBL:EUJ10822.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1650_curated_3
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1487..2071)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI000376037D
RES domain-containing protein {ECO:0000313|EMBL:KGQ18204.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
RES domain-containing protein
scnpilot_solids1_trim150_scaffold_1650_curated_4
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2417..3658)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K8M3_AZOSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL95178.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
scnpilot_solids1_trim150_scaffold_1650_curated_5
unknown

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comp(3816..4049)
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1650_curated_6
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4028..5383)
DNA (1356bp) protein (452aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN50164.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
Sigma 54-dependent transcriptional activator containing CheY-like receiver domain id=2521426 bin=GWF1_Xanthomonadales_69_6 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Two-component response regulator pilR
scnpilot_solids1_trim150_scaffold_1650_curated_7
unknown

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comp(5699..6064)
DNA (366bp) protein (122aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1650_curated_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6276..8786)
DNA (2511bp) protein (837aa)
ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
DNA ligase D n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VQQ8_STEMA
Stenotrophomonas maltophilia strain ZBG7B contig_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86929.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
scnpilot_solids1_trim150_scaffold_1650_curated_9
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8797..9399)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9KUE4_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EIZ03895.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1650_curated_10
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9786..10217
DNA (432bp) protein (144aa)
Putative CBS domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG1C9 RepID=B3T6D9_9ZZZZ
CBS domain protein {ECO:0000313|EMBL:KGQ20444.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
CBS domain-containing protein
scnpilot_solids1_trim150_scaffold_1650_curated_11
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10500..10997
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002ED1E57
Uncharacterized protein {ECO:0000313|EMBL:EYR70266.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1650_curated_12
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11030..11833
DNA (804bp) protein (268aa)
Cinnamoyl ester hydrolase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WS08_PSEUU
Permease {ECO:0000313|EMBL:AKC87650.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
cinnamoyl ester hydrolase; K06889
scnpilot_solids1_trim150_scaffold_1650_curated_13
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11850..11921)
DNA (72bp) protein (24aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
pyridoxine/pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5); K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L9M5_9GAMM
Displaying 13 items

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