ggKbase home page

scnpilot_solids1_trim150_scaffold_3751_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3751_curated_1
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48..389)
DNA (342bp) protein (114aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96); K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
Putative pterin-4-alpha-carbinolamine dehydratase n=3 Tax=Stenotrophomonas maltophilia RepID=PHS_STRMK
scnpilot_solids1_trim150_scaffold_3751_curated_2
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

465..1058
DNA (594bp) protein (198aa)
Fe/S biogenesis protein NfuA n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z3I8_XANCT
Fe/S biogenesis protein NfuA {ECO:0000256|HAMAP-Rule:MF_01637, ECO:0000256|SAAS:SAAS00035357}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
gntY; DNA uptake protein GntY; K07400 Fe/S biogenesis protein NfuA
scnpilot_solids1_trim150_scaffold_3751_curated_3
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1074..2792
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GXK1_XANCT
Putative transmembrane repetitive protein {ECO:0000313|EMBL:KGQ18985.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_3751_curated_4
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2872..3180)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UV68_PSEUP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AER56348.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids1_trim150_scaffold_3751_curated_5
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3177..3494)
DNA (318bp) protein (106aa)
Putative transmembrane protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UV69_PSEUP
Membrane protein {ECO:0000313|EMBL:KGM54993.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
putative transmembrane protein
scnpilot_solids1_trim150_scaffold_3751_curated_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3494..4894)
DNA (1401bp) protein (467aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
asparaginyl-tRNA synthetase; K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22]
asparaginyl-tRNA synthetase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E27998
scnpilot_solids1_trim150_scaffold_3751_curated_7
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4958..5299
DNA (342bp) protein (114aa)
iron-sulfur cluster assembly protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E5780D
Iron-sulfur cluster assembly protein {ECO:0000313|EMBL:KGQ20286.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
iron-sulfur cluster assembly accessory protein; K13628 iron-sulfur cluster assembly protein
scnpilot_solids1_trim150_scaffold_3751_curated_8
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5445..5858
DNA (414bp) protein (138aa)
30S ribosomal protein S6, partial n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B6ACF4
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6
scnpilot_solids1_trim150_scaffold_3751_curated_9
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5870..5986
DNA (117bp) protein (39aa)
30S ribosomal protein S18 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UV74_PSEUP
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
Displaying 9 items

View Taxonomy