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scnpilot_solids1_trim150_scaffold_743_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_743_curated_1
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..674
DNA (672bp) protein (224aa)
Transporter {ECO:0000313|EMBL:KGM55664.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
Citrate transporter id=2528239 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
scnpilot_solids1_trim150_scaffold_743_curated_2
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

732..2030
DNA (1299bp) protein (433aa)
Uncharacterized protein {ECO:0000313|EMBL:KGQ19229.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
Putative uncharacterized protein id=2528220 bin=GWF1_Xanthomonadales_69_6 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
scnpilot_solids1_trim150_scaffold_743_curated_3
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2062..3165
DNA (1104bp) protein (368aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
DNA polymerase IV n=1 Tax=Dyella japonica RepID=UPI0002DD34EC
nucleotidyltransferase/DNA polymerase involved in DNA repair
scnpilot_solids1_trim150_scaffold_743_curated_4
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3257..4462
DNA (1206bp) protein (402aa)
PGAP1 family protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JF17_ANAD2
PGAP1 family protein
PGAP1 family protein {ECO:0000313|EMBL:ACL64374.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
scnpilot_solids1_trim150_scaffold_743_curated_5
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4496..5776
DNA (1281bp) protein (427aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6AHW1_PSEF1
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEF21635.1}; TaxID=743720 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva (strain 12-X).;"
scnpilot_solids1_trim150_scaffold_743_curated_6
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5791..6282
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4327E
Uncharacterized protein {ECO:0000313|EMBL:KFN43064.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_743_curated_7
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6353..8716
DNA (2364bp) protein (788aa)
Tex-like protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WX93_PSEUU
Tex-like protein {ECO:0000313|EMBL:ADV28792.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
Tex-like protein; K06959 uncharacterized protein
scnpilot_solids1_trim150_scaffold_743_curated_8
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8730..9971)
DNA (1242bp) protein (414aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Caulobacter crescentus OR37 RepID=R0D0T0_CAUCE
beta-lactamase
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_743_curated_9
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9982..10584)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z588_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO89588.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_743_curated_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10639..11304)
DNA (666bp) protein (222aa)
Activase of anaerobic class III ribonucleotide reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI13_9GAMM
Activase of anaerobic class III ribonucleotide reductase {ECO:0000313|EMBL:EIL86854.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
nrdG; activase of anaerobic class III ribonucleotide reductase
scnpilot_solids1_trim150_scaffold_743_curated_11
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11301..11501)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000365174B
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_solids1_trim150_scaffold_743_curated_12
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11498..13273)
DNA (1776bp) protein (592aa)
anaerobic ribonucleoside-triphosphate reductase; K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2]
Anaerobic ribonucleoside triphosphate reductase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z1S8_9RHOO
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_solids1_trim150_scaffold_743_curated_13
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13374..13559
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WP22_PSEUU
Uncharacterized protein {ECO:0000313|EMBL:KFN48849.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_743_curated_14
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13614..14015)
DNA (402bp) protein (134aa)
thioesterase n=1 Tax=Xanthomonas axonopodis RepID=UPI00030E8A66
Thioesterase {ECO:0000313|EMBL:KGO99578.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
acyl-CoA hydrolase
scnpilot_solids1_trim150_scaffold_743_curated_15
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14005..15027)
DNA (1023bp) protein (341aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
ribonucleoside-diphosphate reductase (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LA37_9GAMM
scnpilot_solids1_trim150_scaffold_743_curated_16
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15024..17420)
DNA (2397bp) protein (799aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
RRM1; Ribonucleotide reductase of class Ia (aerobic),alpha subunit (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
ribonucleoside-diphosphate reductase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E9F36D
scnpilot_solids1_trim150_scaffold_743_curated_17
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17857..18558)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B65B95
Uncharacterized protein {ECO:0000313|EMBL:KFN46320.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
4'-phosphopantetheinyl transferase
scnpilot_solids1_trim150_scaffold_743_curated_18

Not on your lists

comp(18628..18957)
DNA (330bp) protein (110aa)
Putative integron gene cassette protein (Fragment) n=1 Tax=uncultured bacterium RepID=B0BHW1_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAP48369.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_743_curated_19
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18993..21272)
DNA (2280bp) protein (760aa)
ATP-dependent Clp protease, ATP-binding subunit clpA n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSU6_PSEUU
Clp protease ClpX {ECO:0000313|EMBL:AKC88016.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
ATP-dependent Clp protease ATP-binding subunit ClpA; K03694 ATP-dependent Clp protease ATP-binding subunit ClpA
scnpilot_solids1_trim150_scaffold_743_curated_20
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21343..21711)
DNA (369bp) protein (123aa)
ATP-dependent Clp protease adapter protein ClpS n=2 Tax=Stenotrophomonas maltophilia RepID=G0JZW4_STEMA
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
ATP-dependent Clp protease adapter protein clpS; K06891 ATP-dependent Clp protease adaptor protein ClpS
scnpilot_solids1_trim150_scaffold_743_curated_21
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21722..22186
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000365F08F
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_743_curated_22
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22188..22592
DNA (405bp) protein (135aa)
7,8-dihydro-8-oxoguanine-triphosphatase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B32650
7,8-dihydro-8-oxoguanine-triphosphatase {ECO:0000313|EMBL:KGM56209.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
nudix hydrolase family protein
Displaying 22 items

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