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scnpilot_solids1_trim150_scaffold_3639_curated_3

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(2460..2975)

Top 3 Functional Annotations

Value Algorithm Source
CheW protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WT86_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 149.0
  • Bit_score: 217
  • Evalue 1.10e-53
Chemotaxis protein CheW {ECO:0000313|EMBL:KGO98210.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 172.0
  • Bit_score: 242
  • Evalue 6.00e-61
chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 149.0
  • Bit_score: 217
  • Evalue 3.60e-54

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Taxonomy

Lysobacter defluvii → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGAATAGCCCCGCAGTGCCGCATTCCGCCACCAGCGCCTCCGCCAAGGCCGCTACCGCCGGCGAATTCCTCACCTTCACCCTCGGGCAGGAGGAATACGGGGTCGACATCCTGAAGGTGCAGGAGATCCGCGGCTATGACGCGGTGACCCGCCTGCCGGACGCGCCGGAGTACATCAAGGGCGTCATCAACCTGCGTGGCACCATCGTGCCGGTGATCGACATGCGGGTGAAGTTCCGCCTGGAAGCCAAGGTCGACGCACTGACCGTGATGATCGTCCTGAACGTCGCCGACCGCGTGGTGGGCATGGTGGTGGACAGCGTCTCCGACGTGGTGCAGCTGACCGCCGAGCAGATCCGCGCGATGCCCGAGGTGGGCACCGGCATCGACCGCCGCTTCCTGACCGGCATCGGTGCGCTGGACGAGCGCATGCTGATCCTGCTCGACATCGAAGGCCTGATGACCAGCACCGAGATGGGGCTGGTGGTCGACAGCGCCACCGCCCAGGCGGCCTGA
PROTEIN sequence
Length: 172
MNSPAVPHSATSASAKAATAGEFLTFTLGQEEYGVDILKVQEIRGYDAVTRLPDAPEYIKGVINLRGTIVPVIDMRVKFRLEAKVDALTVMIVLNVADRVVGMVVDSVSDVVQLTAEQIRAMPEVGTGIDRRFLTGIGALDERMLILLDIEGLMTSTEMGLVVDSATAQAA*