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scnpilot_solids1_trim150_scaffold_1824_curated_11

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(10311..11294)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=2 Tax=Stenotrophomonas maltophilia RepID=B4SNK7_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 327.0
  • Bit_score: 519
  • Evalue 2.70e-144
putative LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 327.0
  • Bit_score: 519
  • Evalue 8.40e-145
LysR family transcriptional regulator {ECO:0000313|EMBL:AHY58622.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 327.0
  • Bit_score: 519
  • Evalue 2.90e-144

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGCAGGATCTCAACGATCTCTACTACTTCGCCGCGGTGGTCGACCACGGTGGATTCGCCGCTGCCGAACGCGCCCTGGGCATCCCCAAGTCGCGCCTGAGCCGGCGCATCAGCGCGCTGGAGGCGGAGCTGGGCGTGCGCTTGCTGCAGCGCTCCACGCGGCGCTTCGCCGTCACCGACGTCGGCACCAGCGTGCACCGCCACGCGCAGTCCATGCTGGCCGAAGCGCAGGCCGCGCGCGAGGCGGTGGACCGGCTCAGCGCCGAGCCCCGCGGCAGCGTGCGGGTCAGCGTGCCGGTGTCGATGGCGCAGCAGCAGATGCCAAAGCTGCTGCCGGAATTCATGGCGCTGTATCCGAAGGTGCGCGTGCAGCTGACCGTCAGCAACCGGCGCGTCGATGTCATCAACGAGGGCGTGGACGTCGCCATCCGCGTGCGCAGCAAGCTGGACGAGGACGGCAGCCTGGTGATGCGCAGCTTCGGCCAGATCCAGGAACTGCTGGTTGCCAGCCCGAAATACCTGGACCGCGCCGGCCGCCCACGCGTGCCGGAGGAACTGGCCGAGCACGTCACCCTGAGCGTGAGCGAGGACGAGGCCCGCCAGCGTTGGGAGCTGCACGGTCCCAATGGCGAGGTGCGCCGCATCGAGCTGCAGCCGCGGGTCACCGGTTTCGATTTCCCGATGATGCAGGCGATGGCGGAAGGCGGCGTGGGCATCACGTTGCTGCCGGAAACCATCTGCGCCGACGCGGTGCGCAGCGGTGCGCTGGAAGTGGTGCTGCCGGACTGGCGCCTGCCGCAGGGCATCGCACATGCCGTGTTCGCCTCGCGCCGCGGCATGCTGCCGGCGGTGCGGGTATTCATCGACTTCCTCGCCCAGAAGCTGCCGAAGATGCTGGAAGAGGCGCGGCTGGAATGCAGCGACCCGGAATGCCTGAAGGCAAAGACCAAGGCCAAGGCCGGCGGTAAGGCCAAGGCGGCGTAG
PROTEIN sequence
Length: 328
MQDLNDLYYFAAVVDHGGFAAAERALGIPKSRLSRRISALEAELGVRLLQRSTRRFAVTDVGTSVHRHAQSMLAEAQAAREAVDRLSAEPRGSVRVSVPVSMAQQQMPKLLPEFMALYPKVRVQLTVSNRRVDVINEGVDVAIRVRSKLDEDGSLVMRSFGQIQELLVASPKYLDRAGRPRVPEELAEHVTLSVSEDEARQRWELHGPNGEVRRIELQPRVTGFDFPMMQAMAEGGVGITLLPETICADAVRSGALEVVLPDWRLPQGIAHAVFASRRGMLPAVRVFIDFLAQKLPKMLEEARLECSDPECLKAKTKAKAGGKAKAA*