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scnpilot_solids1_trim150_scaffold_1215_curated_13

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(14733..14903)

Top 3 Functional Annotations

Value Algorithm Source
Rhomboid family membrane protein n=4 Tax=Xanthomonas campestris RepID=B0RR49_XANCB similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 57.0
  • Bit_score: 92
  • Evalue 1.10e-16
Membrane protein {ECO:0000313|EMBL:KGO98144.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 56.0
  • Bit_score: 96
  • Evalue 1.80e-17
integral membrane protein similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 57.0
  • Bit_score: 92
  • Evalue 3.40e-17

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Taxonomy

Lysobacter defluvii → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 171
GGCCTGTTCGAACTGGGCGTGGGCATCACCGGGCTGCAGCCGGGGGTGGCCCATTTCGCCCACCTTGGCGGCATGCTGTTCGGCTGGTTGCTGATCCGTCAGTGGCGCGGCCAGCCGCCGTTCGGCGGGCGCGGTGGCCGGGGCGGGCCGAAAATGCGCATCGTGCGCTGA
PROTEIN sequence
Length: 57
GLFELGVGITGLQPGVAHFAHLGGMLFGWLLIRQWRGQPPFGGRGGRGGPKMRIVR*